Evidence map›Paper›PMID 34116682›Full record

ArticleOrphanet journal of rare diseases2021

Frequency detection of BRAF V600E mutation in a cohort of pediatric langerhans cell histiocytosis patients by next-generation sequencing.

Shunqiao Feng, Lin Han, Mei Yue, Dixiao Zhong, Jing Cao, Yibing Guo, Yanling Sun, Hao Zhang, Zhenhua Cao, Xiaodai Cui and 1 more

Open access · goldAbstract read
In one paragraph

Article in Orphanet journal of rare diseases, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 26 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Shunqiao Feng *Department of Hematology, Children's Hospital of Capital Institute of Pediatrics, Beijing, 100020, China.
Lin Han *Running Gene Inc, Beijing, China.
Mei YueDepartment of Hematology, Children's Hospital of Capital Institute of Pediatrics, Beijing, 100020, China.
Dixiao ZhongDepartment of Hematology, Children's Hospital of Capital Institute of Pediatrics, Beijing, 100020, China.
Jing CaoDepartment of Hematology, Children's Hospital of Capital Institute of Pediatrics, Beijing, 100020, China.
Yibing GuoRunning Gene Inc, Beijing, China.
Yanling SunRunning Gene Inc, Beijing, China.
Hao ZhangRunning Gene Inc, Beijing, China.
Zhenhua CaoRunning Gene Inc, Beijing, China.
Xiaodai CuiDepartment of Key Laboratory, Children's Hospital of Capital Institute of Pediatrics, Beijing, 100020, China. xdcui61@sina.com.
Rong LiuDepartment of Hematology, Children's Hospital of Capital Institute of Pediatrics, Beijing, 100020, China. liu_rong_doctor@163.com.ORCID 0000-0001-5683-9786
Children's Hospital of Capital Institute of Pediatrics · CNCapital Institute of Pediatrics · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundLangerhans cell histiocytosis (LCH) is a rare neoplastic disease that occurs in both children and adults, and BRAF V600E is detected in up to 64% of the patients. Several studies have discussed the associations between BRAF V600E mutation and clinicopathological manifestations, but no clear conclusions have been drawn regarding the clinical significance of the mutation in pediatric patients.

resultsWe retrieved the clinical information for 148 pediatric LCH patients and investigated the BRAF V600E mutation using next-generation sequencing alone or with droplet digital PCR. The overall positive rate of BRAF V600E was 60/148 (41%). The type of sample (peripheral blood and formalin-fixed paraffin-embedded tissue) used for testing was significantly associated with the BRAF V600E mutation status (p-value = 0.000 and 0.000). The risk of recurrence declined in patients who received targeted therapy (p-value = 0.006; hazard ratio 0.164, 95%CI: 0.046 to 0.583). However, no correlation was found between the BRAF V600E status and gender, age, stage, specific organ affected, TP53 mutation status, masses close to the lesion or recurrence.

conclusionsThis is the largest pediatric LCH study conducted with a Chinese population to date. BRAF V600E in LCH may occur less in East Asian populations than in other ethnic groups, regardless of age. Biopsy tissue is a more sensitive sample for BRAF mutation screening because not all of circulating DNA is tumoral. Approaches with low limit of detection or high sensitivity are recommended for mutation screening to avoid type I and II errors.

Indexed as

Histiocytosis, Langerhans-CellProto-Oncogene Proteins B-rafAdultChildCohort StudiesHigh-Throughput Nucleotide SequencingHumansMutationBRAF protein, humanProto-Oncogene Proteins B-rafBiopsy tissueBRAF V600E mutationLangerhans cell histiocytosisNext-generation sequencingPediatrics

Identifiers

PMID34116682
PMCPMC8196454
OpenAlexW3169112230

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.