Evidence map›Paper›PMID 34115138›Full record

ArticleMolecular biology and evolution2021

Evolutionary and Ecological Drivers Shape the Emergence and Extinction of Foot-and-Mouth Disease Virus Lineages.

Antonello Di Nardo, Luca Ferretti, Jemma Wadsworth, Valerie Mioulet, Boris Gelman, Sharon Karniely, Alexey Scherbakov, Ghulam Ziay, Fuat Özyörük, Ünal Parlak and 10 more

Open access · goldAbstract read
In one paragraph

Article in Molecular biology and evolution, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
5.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 34 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 5 institutions in 4 countries.

Antonello Di NardoThe Pirbright Institute, Ash Road, Pirbright, Woking, Surrey, United Kingdom.ORCID 0000-0003-0352-0039
Luca FerrettiBig Data Institute, Li Ka Shing Centre for Health Information and Discovery, Nuffield Department of Medicine, University of Oxford, Oxford, United Kingdom.
Jemma WadsworthThe Pirbright Institute, Ash Road, Pirbright, Woking, Surrey, United Kingdom.
Valerie MiouletThe Pirbright Institute, Ash Road, Pirbright, Woking, Surrey, United Kingdom.
Boris GelmanDivision of Virology, Kimron Veterinary Institute, Beit Dagan, Israel.
Sharon KarnielyDivision of Virology, Kimron Veterinary Institute, Beit Dagan, Israel.
Alexey ScherbakovFederal Governmental Budgetary Institution "Federal Centre for Animal Health" (FGBI "ARRIAH"), Yur'evets, Vladimir, Russia.
Ghulam ZiayCentral Veterinary Diagnostic and Research Laboratory, Kabul, Afghanistan.
Fuat ÖzyörükFaculty of Veterinary Medicine, Harran University, Sanliurfa, Turkey.
Ünal ParlakFoot and Mouth Disease (ŞAP) Institute, Ankara, Turkey.
Pelin Tuncer-GöktunaFoot and Mouth Disease (ŞAP) Institute, Ankara, Turkey.
Reza HassanzadehIran Veterinary Organization, Ministry of Jihad-e-Agriculture, Tehran, Iran.
Mehdi KhalajIran Veterinary Organization, Ministry of Jihad-e-Agriculture, Tehran, Iran.
Seyed Mohsen DastoorIran Veterinary Organization, Ministry of Jihad-e-Agriculture, Tehran, Iran.
Darab AbdollahiIran Veterinary Organization, Ministry of Jihad-e-Agriculture, Tehran, Iran.
Ehtisham-Ul-Haq KhanLivestock and Dairy Development Department, Government of Punjab, Rawalpindi, Pakistan.
Muhammad AfzalFood and Agriculture Organization of the United Nations, Pakistan Office, Islamabad Pakistan.
Manzoor HussainFood and Agriculture Organization of the United Nations, Pakistan Office, Islamabad Pakistan.
Nick J KnowlesThe Pirbright Institute, Ash Road, Pirbright, Woking, Surrey, United Kingdom.
Donald P KingThe Pirbright Institute, Ash Road, Pirbright, Woking, Surrey, United Kingdom.
The Pirbright Institute · GBAll-Russian Research Institute for Animal Health · RUGovernment of Pakistan · PKHarran University · TRUniversity of Oxford · GB

Funding

Biotechnology and Biological Sciences Research Council BBS/E/I/00007036Biotechnology and Biological Sciences Research Council BBS/E/I/0007035
6 · The paper itself

Abstract

Livestock farming across the world is constantly threatened by the evolutionary turnover of foot-and-mouth disease virus (FMDV) strains in endemic systems, the underlying dynamics of which remain to be elucidated. Here, we map the eco-evolutionary landscape of cocirculating FMDV lineages within an important endemic virus pool encompassing Western, Central, and parts of Southern Asia, reconstructing the evolutionary history and spatial dynamics over the last 20 years that shape the current epidemiological situation. We demonstrate that new FMDV variants periodically emerge from Southern Asia, precipitating waves of virus incursions that systematically travel in a westerly direction. We evidence how metapopulation dynamics drive the emergence and extinction of spatially structured virus populations, and how transmission in different host species regulates the evolutionary space of virus serotypes. Our work provides the first integrative framework that defines coevolutionary signatures of FMDV in regional contexts to help understand the complex interplay between virus phenotypes, host characteristics, and key epidemiological determinants of transmission that drive FMDV evolution in endemic settings.

Indexed as

Foot-and-Mouth DiseaseFoot-and-Mouth Disease VirusAnimalsAsiaSerogroupand Southern AsiaCentralfoot-and-mouth diseasemolecular epidemiologyphylodynamicsphylogeographyWestern

Identifiers

PMID34115138
PMCPMC8476141
OpenAlexW3172845032

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.