Evidence map›Paper›PMID 34114793›Full record

ArticleACS infectious diseases2021

Synthesis and Antibacterial Activity of Propylamycin Derivatives Functionalized at the 5''- and Other Positions with a View to Overcoming Resistance Due to Aminoglycoside Modifying Enzymes.

Dimitrijs Lubriks, Rimants Zogota, Vikram A Sarpe, Takahiko Matsushita, Girish C Sati, Klara Haldimann, Marina Gysin, Erik C Böttger, Andrea Vasella, Edgars Suna and 2 more

Open access · greenAbstract read
In one paragraph

Article in ACS infectious diseases, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.7field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Synthesis of 4-Tetrahedron · 2023
    Article
  5. Synthesis, Antibacterial and Antiribosomal Activity of the 3Antibiotics (Basel, Switzerland) · 2022
    Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 3 countries.

Dimitrijs LubriksLatvian Institute of Organic Synthesis, Riga, Latvia LV-1006.
Rimants ZogotaLatvian Institute of Organic Synthesis, Riga, Latvia LV-1006.
Vikram A SarpeDepartment of Pharmaceutical and Biomedical Sciences, University of Georgia, 250 West Green Street, Athens, Georgia 30602, United States.ORCID 0000-0001-9855-8923
Takahiko MatsushitaDepartment of Chemistry, Wayne State University, 5101 Cass Avenue, Detroit, Michigan 48202, United States.
Girish C SatiDepartment of Chemistry, Wayne State University, 5101 Cass Avenue, Detroit, Michigan 48202, United States.ORCID 0000-0002-2861-9353
Klara HaldimannInstitute of Medical Microbiology, University of Zurich, Gloriastrasse 28, 8006 Zürich, Switzerland.
Marina GysinInstitute of Medical Microbiology, University of Zurich, Gloriastrasse 28, 8006 Zürich, Switzerland.
Erik C BöttgerInstitute of Medical Microbiology, University of Zurich, Gloriastrasse 28, 8006 Zürich, Switzerland.
Andrea VasellaOrganic Chemistry Laboratory, ETH Zürich, Vladimir-Prelog-Weg 1-5/10, 8093 Zürich, Switzerland.
Edgars SunaLatvian Institute of Organic Synthesis, Riga, Latvia LV-1006.ORCID 0000-0002-3078-0576
Sven N HobbieInstitute of Medical Microbiology, University of Zurich, Gloriastrasse 28, 8006 Zürich, Switzerland.
David CrichDepartment of Pharmaceutical and Biomedical Sciences, University of Georgia, 250 West Green Street, Athens, Georgia 30602, United States.ORCID 0000-0003-2400-0083
University of Zurich · CHLatvijas Organiskās Sintēzes Institūts · LVUniversity of Georgia · USWayne State University · USETH Zurich · CH

Funding

Shaping Next Generation Aminoglycoside Antibiotics for Treatment of Multidrug-Resistant DiseasesR01AI123352 · NIAID · WAYNE STATE UNIVERSITY · PI CRICH, DAVID · 2016 to 2019
$2.7M
NIAID NIH HHS R01 AI123352
6 · The paper itself

Abstract

Propylamycin (4'-deoxy-4'-propylparomomycin) is a next generation aminoglycoside antibiotic that displays increased antibacterial potency over the parent, coupled with reduced susceptibility to resistance determinants and reduced ototoxicity in the guinea pig model. Propylamycin nevertheless is inactivated by APH(3')-Ia, a specific aminoglycoside phosphotransferase isozyme that acts on the primary hydroxy group of the ribofuranosyl moiety (at the 5''-position). To overcome this problem, we have prepared and studied the antibacterial and antiribosomal activity of various propylamycin derivatives carrying amino or substituted amino groups at the 5''-position in place of the vulnerable hydroxy group. We find that the introduction of an additional basic amino group at this position, while overcoming the action of the aminoglycoside phosphoryltransferase isozymes acting at the 5''-position as anticipated, results in a significant drop in selectivity for the bacterial over the eukaryotic ribosomes that is predictive of increased ototoxicity. In contrast, 5''-deoxy-5''-formamidopropylamycin retains the excellent across-the-board levels of antibacterial activity of propylamycin itself, while circumventing the action of the offending aminoglycoside phosphotransferase isozymes and affording even greater selectivity for the bacterial over the eukaryotic ribosomes. Other modifications to address the susceptibility of propylamycin to the APH(3')-Ia isozyme including deoxygenation at the 3'-position and incorporation of a 6',5''-bis(hydroxyethylamino) modification offer no particular advantage.

Indexed as

AminoglycosidesAnti-Bacterial AgentsAnimalsGuinea PigsMicrobial Sensitivity TestsRibosomesAminoglycosidesAnti-Bacterial Agentspropylamycinaminoglycoside modifying enzymesantibacterialantiribosomalototoxicityribosomal methyltransferases

Identifiers

PMID34114793
PMCPMC8364506
OpenAlexW3171232775

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.