Evidence map›Paper›PMID 34113005›Full record

ArticleGenetics in medicine : official journal of the American College of Medical Genetics2021

Rare variants in KDR, encoding VEGF Receptor 2, are associated with tetralogy of Fallot.

Doris Škorić-Milosavljević, Najim Lahrouchi, Fernanda M Bosada, Gregor Dombrowsky, Simon G Williams, Robert Lesurf, Fleur V Y Tjong, Roddy Walsh, Ihssane El Bouchikhi, Jeroen Breckpot and 39 more

Erratum issuedOpen access · hybridAbstract read
In one paragraph

Article in Genetics in medicine : official journal of the American College of Medical Genetics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Genetics of Congenital Heart Disease.Clinics in perinatology · 2025
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  4. A novel mutation inGenes & diseases · 2025
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  6. In-Depth Genomic Analysis: The New Challenge in Congenital Heart Disease.International journal of molecular sciences · 2024
    Review
  7. Article
  8. Review
  9. Review
  10. Review
  11. Article
  12. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

49 authors at 20 institutions in 8 countries.

Doris Škorić-Milosavljević *Department of Clinical and Experimental Cardiology, Amsterdam University Medical Center, Amsterdam, The Netherlands.
Najim Lahrouchi *Department of Clinical and Experimental Cardiology, Amsterdam University Medical Center, Amsterdam, The Netherlands.
Fernanda M Bosada *Department of Medical Biology, Amsterdam University Medical Center, Amsterdam, The Netherlands.
Gregor DombrowskyDepartment of Congenital Heart Disease and Pediatric Cardiology, Universitätsklinikum Schleswig-Holstein Kiel, Kiel, Germany.
Simon G WilliamsDivision of Cardiovascular Sciences, School of Medical Sciences, Faculty of Biology, Medicine and Health, The University of Manchester, Manchester, UK.
Robert LesurfGenetics and Genome Biology Program, The Hospital for Sick Children, Toronto, ON, Canada.
Fleur V Y TjongDepartment of Clinical and Experimental Cardiology, Amsterdam University Medical Center, Amsterdam, The Netherlands.
Roddy WalshDepartment of Clinical and Experimental Cardiology, Amsterdam University Medical Center, Amsterdam, The Netherlands.
Ihssane El BouchikhiLaboratory of Medical Genetics and Oncogenetics, HASSAN II University Hospital, Fez, Morocco.
Jeroen BreckpotCenter for Human Genetics Leuven and Catholic University Leuven, Leuven, Belgium.
Enrique AudainDepartment of Congenital Heart Disease and Pediatric Cardiology, Universitätsklinikum Schleswig-Holstein Kiel, Kiel, Germany.
Aho IlgunDepartment of Medical Biology, Amsterdam University Medical Center, Amsterdam, The Netherlands.
Leander BeekmanDepartment of Clinical and Experimental Cardiology, Amsterdam University Medical Center, Amsterdam, The Netherlands.
Ilham RatbiCentre de Recherche en Génomique des Pathologies Humaines (GENOPATH), Faculté de Médecine et de Pharmacie, Mohammed V University of Rabat, Rabat, Morocco.
Alanna StrongDivision of Human Genetics, Children's Hospital of Philadelphia, Philadelphia, PA, USA.
Maximilian MuenkeMedical Genetics Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD, USA.
Solveig HeideDépartement de génétique, Hôpital Pitié-Salpêtrière, APHP Sorbonne Université, Paris, France.
Alison M MuirDepartment of Pediatrics, Division of Genetic Medicine, University of Washington, Seattle, WA, USA.
Mariam HababaDepartment of Clinical and Experimental Cardiology, Amsterdam University Medical Center, Amsterdam, The Netherlands.
Laura CrossDivision of Clinical Genetics, Children's Mercy Hospital, Kansas City, MO, USA.
Dihong ZhouDivision of Clinical Genetics, Children's Mercy Hospital, Kansas City, MO, USA.
Tomi PastinenCenter for Pediatric Genomic Medicine, Children's Mercy Hospital and School of Medicine, University of Missouri-Kansas City, Kansas City, MO, USA.
German Competence Network for Congenital Heart Defects
Elaine ZackaiDivision of Human Genetics, Children's Hospital of Philadelphia, Philadelphia, PA, USA.
Samir AtmaniHASSAN II University Hospital, Fez, Morocco.
Karim OuldimFaculty of Medicine and Pharmacy, Medical Genetics and Oncogenetics Unit, Sidi Mohamed Ben Abdellah University, Fez, Morocco.
Najlae AdadiCentre de Recherche en Génomique des Pathologies Humaines (GENOPATH), Faculté de Médecine et de Pharmacie, Mohammed V University of Rabat, Rabat, Morocco.
Katharina SteindlInstitute of Medical Genetics, University of Zurich, Zurich, Switzerland.
Anita RauchInstitute of Medical Genetics, University of Zurich, Zurich, Switzerland.
David BrookUniversity of Nottingham, Queen's Medical Centre, Nottingham, UK.
Anna WilsdonUniversity of Nottingham, Queen's Medical Centre, Nottingham, UK.
Irene KuipersDepartment of Pediatric Cardiology, Amsterdam University Medical Center, Amsterdam, The Netherlands.
Nico A BlomDepartment of Pediatric Cardiology, Amsterdam University Medical Center, Amsterdam, The Netherlands.
Barbara J MulderDepartment of Clinical and Experimental Cardiology, Amsterdam University Medical Center, Amsterdam, The Netherlands.
Heather C MeffordDepartment of Pediatrics, Division of Genetic Medicine, University of Washington, Seattle, WA, USA.
Boris KerenDépartement de génétique, Hôpital Pitié-Salpêtrière, APHP Sorbonne Université, Paris, France.
Pascal JosetInstitute of Medical Genetics, University of Zurich, Zurich, Switzerland.
Paul KruszkaMedical Genetics Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD, USA.
Isabelle ThiffaultCenter for Pediatric Genomic Medicine, Children's Mercy Hospital and School of Medicine, University of Missouri-Kansas City, Kansas City, MO, USA.
Sarah E SheppardDivision of Human Genetics, Children's Hospital of Philadelphia, Philadelphia, PA, USA.
Amy RobertsDepartment of Cardiology, Boston Children's Hospital, and Department of Pediatrics, Harvard Medical School, Boston, MA, USA.
Elisabeth M LodderDepartment of Clinical and Experimental Cardiology, Amsterdam University Medical Center, Amsterdam, The Netherlands.
Bernard D KeavneyDivision of Cardiovascular Sciences, School of Medical Sciences, Faculty of Biology, Medicine and Health, The University of Manchester, Manchester, UK.
Sally-Ann B ClurDepartment of Pediatric Cardiology, Amsterdam University Medical Center, Amsterdam, The Netherlands.
Seema MitalThe Hospital for Sick Children, Toronto, ON, Canada.
Marc-Philip HitzDepartment of Congenital Heart Disease and Pediatric Cardiology, Universitätsklinikum Schleswig-Holstein Kiel, Kiel, Germany.
Vincent M ChristoffelsDepartment of Medical Biology, Amsterdam University Medical Center, Amsterdam, The Netherlands.
Alex V Postma *Department of Medical Biology, Amsterdam University Medical Center, Amsterdam, The Netherlands. a.v.postma@amsterdamumc.nl.
Connie R Bezzina *Department of Clinical and Experimental Cardiology, Amsterdam University Medical Center, Amsterdam, The Netherlands. c.r.bezzina@amsterdamumc.nl.
Amsterdam University Medical Centers · NLChildren's Hospital of Philadelphia · USChildren's Mercy Hospital · USUniversity of Lübeck · DEUniversity of Zurich · CHCentre Hospitalier Universitaire Hassan II · MADeutsches Herzzentrum der Charité · DEMohammed V University · MANational Human Genome Research Institute · USSorbonne Université · FRUniversity of Nottingham · GBUniversity of Washington · USBoston Children's Hospital · USFriedrich-Alexander-Universität Erlangen-Nürnberg · DEGerman Centre for Cardiovascular Research · DEHospital for Sick Children · CALeiden University Medical Center · NLManchester Academic Health Science Centre · GBSidi Mohamed Ben Abdellah University · MAUniversitäts-Herzzentrum Freiburg-Bad Krozingen · DE

Funding

Administrative Coordinating Center: Cardiovascular Development and Pediatric Cardiac Genomics ConsortiaU01HL131003 · NHLBI · CINCINNATI CHILDRENS HOSP MED CTR · PI CNOTA, JAMES, OLLBERDING, NICHOLAS J · 2016 to 2024
$54.8M
Genetics of Hypoplastic Left Heart SyndromeUM1HL128761 · NHLBI · J. DAVID GLADSTONE INSTITUTES · PI BERNSTEIN, DANIEL, SRIVASTAVA, DEEPAK · 2015 to 2019
$2.5M
The Genomic Basis of Congenital Heart Disease and Neurodevelopmental OutcomesUM1HL098147 · NHLBI · BOSTON CHILDREN'S HOSPITAL · PI NEWBURGER, JANE W., ROBERTS, AMY E · 2015 to 2019
$2.4M
Genetics of conotruncal defects and associated neurodevelopmental outcomesUM1HL098123 · NHLBI · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI GELB, BRUCE D · 2015 to 2019
$2.3M
Genetics and genomics of congenital heart disease and associated neurodevelopmental abnormalitiesUM1HL098162 · NHLBI · YALE UNIVERSITY · PI BRUECKNER, MARTINA, GUPTA, ABHA RANI · 2015 to 2019
$2.2M
Bridging the Gap between Genomics and Clinical Outcomes in CHDUM1HL128711 · NHLBI · UNIVERSITY OF UTAH · PI TRISTANI-FIROUZI, MARTIN, YANDELL, MARK DOUGLAS · 2015 to 2019
$2.0M
Pediatric Heart Network Joint Heart Program ConsortiumUM1HL172717 · NHLBI · CINCINNATI CHILDRENS HOSP MED CTR · PI Louis Bezold, James Cnota · 2024 to 2026
$1.3M
British Heart Foundation CH/13/2/30154British Heart Foundation RG/15/12/31616British Heart Foundation RG/F/21/110050NHLBI NIH HHS U01 HL131003NHLBI NIH HHS UM1 HL098123NHLBI NIH HHS UM1 HL098147NHLBI NIH HHS UM1 HL098162NHLBI NIH HHS UM1 HL128711NHLBI NIH HHS UM1 HL128761NHLBI NIH HHS UM1 HL172717
6 · The paper itself

Abstract

purposeRare genetic variants in KDR, encoding the vascular endothelial growth factor receptor 2 (VEGFR2), have been reported in patients with tetralogy of Fallot (TOF). However, their role in disease causality and pathogenesis remains unclear.

methodsWe conducted exome sequencing in a familial case of TOF and large-scale genetic studies, including burden testing, in >1,500 patients with TOF. We studied gene-targeted mice and conducted cell-based assays to explore the role of KDR genetic variation in the etiology of TOF.

resultsExome sequencing in a family with two siblings affected by TOF revealed biallelic missense variants in KDR. Studies in knock-in mice and in HEK 293T cells identified embryonic lethality for one variant when occurring in the homozygous state, and a significantly reduced VEGFR2 phosphorylation for both variants. Rare variant burden analysis conducted in a set of 1,569 patients of European descent with TOF identified a 46-fold enrichment of protein-truncating variants (PTVs) in TOF cases compared to controls (P = 7 × 10

conclusionRare KDR variants, in particular PTVs, strongly associate with TOF, likely in the setting of different inheritance patterns. Supported by genetic and in vivo and in vitro functional analysis, we propose loss-of-function of VEGFR2 as one of the mechanisms involved in the pathogenesis of TOF.

Indexed as

Tetralogy of FallotVascular Endothelial Growth Factor Receptor-2AnimalsExome SequencingGenetic Predisposition to DiseaseHEK293 CellsHumansMiceKDR protein, humanVascular Endothelial Growth Factor Receptor-2

Identifiers

PMID34113005
PMCPMC8486653
OpenAlexW3169642516

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.