Evidence map›Paper›PMID 34112817›Full record

ArticleScientific reports2021

Proteomic and genomic analysis of acid dentin lysate with focus on TGF-β signaling.

Jila Nasirzade, Zahra Kargarpour, Goran Mitulović, Franz Josef Strauss, Layla Panahipour, Frank Schwarz, Reinhard Gruber

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 4 countries.

Jila NasirzadeDepartment of Oral Biology, Dental School, Medical University of Vienna, Sensengasse 2a, 1090, Vienna, Austria.
Zahra KargarpourDepartment of Oral Biology, Dental School, Medical University of Vienna, Sensengasse 2a, 1090, Vienna, Austria.
Goran MitulovićClinical Department of Laboratory Medicine Proteomics Core Facility, Medical University Vienna, Vienna, Austria.
Franz Josef StraussDepartment of Oral Biology, Dental School, Medical University of Vienna, Sensengasse 2a, 1090, Vienna, Austria.
Layla PanahipourDepartment of Oral Biology, Dental School, Medical University of Vienna, Sensengasse 2a, 1090, Vienna, Austria.
Frank SchwarzDepartment of Oral Surgery and Implantology, Johann Wolfgang Goethe-University, Frankfurt, Germany.
Reinhard GruberDepartment of Oral Biology, Dental School, Medical University of Vienna, Sensengasse 2a, 1090, Vienna, Austria. reinhard.gruber@meduniwien.ac.at.
Medical University of Vienna · ATGoethe University Frankfurt · DEUniversity of Bern · CHUniversity of Chile · CL

Funding

Austrian Science Fund FWF I 4072
6 · The paper itself

Abstract

Particulate autologous tooth roots are increasingly used for alveolar bone augmentation; however, the proteomic profile of acid dentin lysate and the respective cellular response have not been investigated. Here we show that TGF-β1 is among the 226 proteins of acid dentin lysate (ADL) prepared from porcine teeth. RNA sequencing identified 231 strongly regulated genes when gingival fibroblasts were exposed to ADL. Out of these genes, about one third required activation of the TGF-β receptor type I kinase including interleukin 11 (IL11) and NADPH oxidase 4 (NOX4). Reverse transcription-quantitative polymerase chain reaction and immunoassay confirmed the TGF-β-dependent expression of IL11 and NOX4. The activation of canonical TGF-β signaling by ADL was further confirmed by the phosphorylation of Smad3 and translocation of Smad2/3, using Western blot and immunofluorescence staining, respectively. Finally, we showed that TGF-β activity released from dentin by acid lysis adsorbs to titanium and collagen membranes. These findings suggest that dentin particles are a rich source of TGF-β causing a major response of gingival fibroblasts.

Indexed as

GenomicsProteomicsSignal TransductionCollagenDentinFibroblastsGene Expression ProfilingGingivaProtein BindingTranscriptomeTransforming Growth Factor betaCollagenTransforming Growth Factor beta

Identifiers

PMID34112817
PMCPMC8192760
OpenAlexW3167426393

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.