Evidence map›Paper›PMID 34111454›Full record

ArticleThe Journal of allergy and clinical immunology2022

Polygenic prediction of atopic dermatitis improves with atopic training and filaggrin factors.

Christopher H Arehart, Michelle Daya, Monica Campbell, Meher Preethi Boorgula, Nicholas Rafaels, Sameer Chavan, Gloria David, Jon Hanifin, Mark K Slifka, Richard L Gallo and 11 more

Open access · greenAbstract read
In one paragraph

Article in The Journal of allergy and clinical immunology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
4.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 28 citations in OpenAlex.

  1. Sexual Dimorphism in Allergic and Mast Cell-Associated Diseases.Clinical reviews in allergy & immunology · 2026
    Review
  2. Review
  3. Article
  4. Article
  5. Review
  6. The Current and Future of Biomarkers of Immune Related Adverse Events.Rheumatic diseases clinics of North America · 2024
    Review
  7. Genetic and Immunological Pathogenesis of Atopic Dermatitis.The Journal of investigative dermatology · 2024
    Review
  8. Review
  9. Novel insights into atopic dermatitis.The Journal of allergy and clinical immunology · 2023
    Review
  10. Review
  11. Recent progress in the genetic and epigenetic underpinnings of atopy.The Journal of allergy and clinical immunology · 2023
    Review
  12. Factors associated with severity of atopic dermatitis - a Finnish cross-sectional study.Journal of the European Academy of Dermatology and Venereology : JEADV · 2022
    Observational
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 11 institutions in 1 country.

Christopher H ArehartDepartment of Medicine, University of Colorado Anschutz Medical Campus, Aurora, Colo.
Michelle DayaDepartment of Medicine, University of Colorado Anschutz Medical Campus, Aurora, Colo.
Monica CampbellDepartment of Medicine, University of Colorado Anschutz Medical Campus, Aurora, Colo.
Meher Preethi BoorgulaDepartment of Medicine, University of Colorado Anschutz Medical Campus, Aurora, Colo.
Nicholas RafaelsDepartment of Medicine, University of Colorado Anschutz Medical Campus, Aurora, Colo.
Sameer ChavanDepartment of Medicine, University of Colorado Anschutz Medical Campus, Aurora, Colo.
Gloria DavidRho, Inc, Durham, NC.
Jon HanifinDepartment of Dermatology, Oregon Health and Science University, Portland, Ore.
Mark K SlifkaDepartment of Dermatology, Oregon Health and Science University, Portland, Ore.
Richard L GalloDepartment of Dermatology, University of California San Diego, San Diego, Calif.
Tissa HataDepartment of Dermatology, University of California San Diego, San Diego, Calif.
Lynda C SchneiderDivision of Immunology, Boston Children's Hospital, Boston, Mass.
Amy S PallerDepartment of Dermatology, Northwestern University Feinberg School of Medicine, Chicago, Ill; Department of Pediatrics (Dermatology), Ann & Robert H. Lurie Children's Hospital of Chicago, Chicago, Ill.
Peck Y OngDivision of Clinical Immunology and Allergy, Children's Hospital Los Angeles, Los Angeles, Calif; Keck School of Medicine, University of Southern California, Los Angeles, Calif.
Jonathan M SpergelDepartment of Pediatrics, Perelman School of Medicine at University of Pennsylvania, Philadelphia, Pa.
Emma Guttman-YasskyIcahn School of Medicine at Mount Sinai, New York, NY.
Donald Y M LeungDivision of Allergy and Immunology, Department of Pediatrics, National Jewish Health, Denver, Colo.
Lisa A BeckDepartment of Dermatology, Medicine and Pathology, University of Rochester Medical Center, Rochester, NY.
Christopher R GignouxDepartment of Medicine, University of Colorado Anschutz Medical Campus, Aurora, Colo.
Rasika A MathiasDepartment of Medicine, Johns Hopkins University Department of Medicine, Baltimore, Md.
Kathleen C BarnesDepartment of Medicine, University of Colorado Anschutz Medical Campus, Aurora, Colo. Electronic address: Kathleen.Barnes@cuanschutz.edu.
University of Colorado Anschutz Medical Campus · USOregon Health & Science University · USUniversity of California, San Diego · USBoston Children's Hospital · USChildren's Hospital of Los Angeles · USIcahn School of Medicine at Mount Sinai · USJohns Hopkins Medicine · USNational Jewish Health · USNorthwestern University · USUniversity of Pennsylvania · USUniversity of Rochester Medical Center · US

Funding

Transplantation GroupUM2AI117870 · NIAID · RHO FEDERAL SYSTEMS DIVISION, INC. · PI DAVID, GLORIA · 2015 to 2023
$208.1M
Upgrade of confocal microscopy at the Oregon National Primate Research CenterP51OD011092 · OD · OREGON HEALTH & SCIENCE UNIVERSITY · PI Bonnie J. Nagel · 2012 to 2026
$203.9M
Targeted Microbiome Transplant in Atopic DermatitisU19AI117673 · NIAID · NATIONAL JEWISH HEALTH · PI GEHA, RAIF SALIM · 2015 to 2019
$30.6M
Biomarker Identification, Viral Susceptibility and Management in S. aureus Colonized AD PatientsU01AI152011 · NIAID · UNIVERSITY OF ROCHESTER · PI Lisa Ann Beck · 2020 to 2026
$3.2M
NIAID NIH HHS U01 AI152011NIAID NIH HHS U19 AI117673NIAID NIH HHS UM2 AI117870NIH HHS P51 OD011092
6 · The paper itself

Abstract

backgroundWhile numerous genetic loci associated with atopic dermatitis (AD) have been discovered, to date, work leveraging the combined burden of AD risk variants across the genome to predict disease risk has been limited.

objectivesThis study aims to determine whether polygenic risk scores (PRSs) relying on genetic determinants for AD provide useful predictions for disease occurrence and severity. It also explicitly tests the value of including genome-wide association studies of related allergic phenotypes and known FLG loss-of-function (LOF) variants.

methodsAD PRSs were constructed for 1619 European American individuals from the Atopic Dermatitis Research Network using an AD training dataset and an atopic training dataset including AD, childhood onset asthma, and general allergy. Additionally, whole genome sequencing data were used to explore genetic scoring specific to FLG LOF mutations.

resultsGenetic scores derived from the AD-only genome-wide association studies were predictive of AD cases (PRS

conclusionsThis study demonstrates how PRSs for AD that include genetic determinants across atopic phenotypes and FLG LOF variants may be a promising tool for identifying individuals at high risk for developing disease and specifically severe disease.

Indexed as

Dermatitis, AtopicFemaleFilaggrin ProteinsGenetic Predisposition to DiseaseGenome-Wide Association StudyHumansInfantLinkage DisequilibriumLoss of Function MutationMalePhenotypeFilaggrin Proteinsallergic diseaseAtopic dermatitisatopic marchdisease predictionfilaggringenetic architecturegenetic predispositionpolygenic risk score

Identifiers

PMID34111454
PMCPMC8973457
OpenAlexW3167795102

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.