Evidence map›Paper›PMID 34111227›Full record

ArticlePLoS pathogens2021

Long non-coding RNA KIKAT/LINC01061 as a novel epigenetic regulator that relocates KDM4A on chromatin and modulates viral reactivation.

Wan-Shan Yang, Wayne W Yeh, Mel Campbell, Lung Chang, Pei-Ching Chang

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.4field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 7 citations in OpenAlex.

  1. Review
  2. Review
  3. Role of angiomotin family members in human diseases (Review).Experimental and therapeutic medicine · 2024
    Review
  4. Review
  5. Review
  6. Role of Virus-Induced Host Cell Epigenetic Changes in Cancer.International journal of molecular sciences · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Wan-Shan YangInstitute of Microbiology and Immunology, National Yang Ming Chiao Tung University, Hsinchu, Taiwan.
Wayne W YehInstitute of Microbiology and Immunology, National Yang Ming Chiao Tung University, Hsinchu, Taiwan.
Mel CampbellUC Davis Cancer Center, University of California, Davis, California, United States of America.
Lung ChangDepartment of Pediatrics, MacKay Children's Hospital and MacKay Memorial Hospital, Taipei, Taiwan.ORCID 0000-0003-3905-0331
Pei-Ching ChangInstitute of Microbiology and Immunology, National Yang Ming Chiao Tung University, Hsinchu, Taiwan.ORCID 0000-0001-8665-5494
National Yang Ming Chiao Tung University · TWMackay Memorial Hospital · TWUC Davis Comprehensive Cancer Center

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

KDM4A is a histone lysine demethylase that has been described as an oncogene in various types of cancer. The importance of KDM4A-mediated epigenetic regulation in tumorigenesis is just emerging. Here, by using Kaposi's sarcoma associated herpesvirus (KSHV) as a screening model, we identified 6 oncogenic virus-induced long non-coding RNAs (lncRNAs) with the potential to open chromatin. RNA immunoprecipitation revealed KSHV-induced KDM4A-associated transcript (KIKAT)/LINC01061 as a binding partner of KDM4A. Integrated ChIP-seq and RNA-seq analysis showed that the KIKAT/LINC01061 interaction may mediate relocalization of KDM4A from the transcription start site (TSS) of the AMOT promoter region and transactivation of AMOT, an angiostatin binding protein that regulates endothelial cell migration. Knockdown of AMOT diminished the migration ability of uninfected SLK and iSLK-BAC16 cells in response to KIKAT/LINC01061 overexpression. Thus, we conclude that KIKAT/LINC01061 triggered shifting of KDM4A as a potential epigenetic mechanism regulating gene transactivation. Dysregulation of KIKAT/LINC01061 expression may represent a novel pathological mechanism contributing to KDM4A oncogenicity.

Indexed as

Cell LineChromatinEpigenesis, GeneticGene Expression Regulation, NeoplasticHerpesviridae InfectionsHerpesvirus 8, HumanHumansJumonji Domain-Containing Histone DemethylasesRNA, Long NoncodingVirus ActivationChromatinJumonji Domain-Containing Histone DemethylasesKDM4A protein, humanRNA, Long Noncoding

Identifiers

PMID34111227
PMCPMC8219169
OpenAlexW3170624861

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.