Evidence map›Paper›PMID 34109021›Full record

ArticleChemical science2020

Thermodynamic consequences of Tyr to Trp mutations in the cation-π-mediated binding of trimethyllysine by the HP1 chromodomain.

Mackenzie W Krone, Katherine I Albanese, Gage O Leighton, Cyndi Qixin He, Ga Young Lee, Marc Garcia-Borràs, Alex J Guseman, David C Williams, K N Houk, Eric M Brustad and 1 more

Abstract read
In one paragraph

Article in Chemical science, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Magnetic resonance letters · 2025
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Trimethyllysine: From Carnitine Biosynthesis to Epigenetics.International journal of molecular sciences · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Mackenzie W KroneUniversity of North Carolina at Chapel Hill 131 South Road, Campus Box 3290 Chapel Hill NC 27599 USA mlwaters@email.unc.edu.ORCID https://orcid.org/0000-0002-8602-3742
Katherine I AlbaneseUniversity of North Carolina at Chapel Hill 131 South Road, Campus Box 3290 Chapel Hill NC 27599 USA mlwaters@email.unc.edu.ORCID https://orcid.org/0000-0002-2336-1621
Gage O LeightonDepartment of Biochemistry and Biophysics, University of North Carolina at Chapel Hill 120 Mason Farm Rd, Campus Box 7260 Chapel Hill NC 27599 USA.ORCID https://orcid.org/0000-0003-4636-0370
Cyndi Qixin HeDepartment of Chemistry and Biochemistry, University of California at Los Angeles 607 Charles E. Young Drive East, Box 951569 Los Angeles CA 90095-1569 USA.
Ga Young LeeDepartment of Chemistry and Biochemistry, University of California at Los Angeles 607 Charles E. Young Drive East, Box 951569 Los Angeles CA 90095-1569 USA.ORCID https://orcid.org/0000-0002-7453-7148
Marc Garcia-BorràsDepartment of Chemistry and Biochemistry, University of California at Los Angeles 607 Charles E. Young Drive East, Box 951569 Los Angeles CA 90095-1569 USA.ORCID https://orcid.org/0000-0001-9458-1114
Alex J GusemanUniversity of North Carolina at Chapel Hill 131 South Road, Campus Box 3290 Chapel Hill NC 27599 USA mlwaters@email.unc.edu.ORCID https://orcid.org/0000-0002-9796-5719
David C WilliamsDepartment of Pathology and Laboratory Medicine, University of North Carolina at Chapel Hill Campus Box 7525, Brinkhous-Bullitt Building Chapel Hill NC 27599 USA.ORCID https://orcid.org/0000-0002-6536-4038
K N HoukDepartment of Chemistry and Biochemistry, University of California at Los Angeles 607 Charles E. Young Drive East, Box 951569 Los Angeles CA 90095-1569 USA.ORCID https://orcid.org/0000-0002-8387-5261
Eric M BrustadUniversity of North Carolina at Chapel Hill 131 South Road, Campus Box 3290 Chapel Hill NC 27599 USA mlwaters@email.unc.edu.ORCID https://orcid.org/0000-0002-7031-5433
Marcey L WatersUniversity of North Carolina at Chapel Hill 131 South Road, Campus Box 3290 Chapel Hill NC 27599 USA mlwaters@email.unc.edu.ORCID https://orcid.org/0000-0002-4917-5755

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Evolution has converged on cation-π interactions for recognition of quaternary alkyl ammonium groups such as trimethyllysine (Kme3). While computational modelling indicates that Trp provides the strongest cation-π interaction of the native aromatic amino acids, there is limited corroborative data from measurements within proteins. Herein we investigate a Tyr to Trp mutation in the binding pocket of the HP1 chromodomain, a reader protein that recognizes Kme3. Binding studies demonstrate that the Trp-mediated cation-π interaction is about -5 kcal mol

Identifiers

PMID34109021
PMCPMC8152637

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.