Evidence map›Paper›PMID 34106917›Full record

ArticlePLoS computational biology2021

Modeling influenza seasonality in the tropics and subtropics.

Haokun Yuan, Sarah C Kramer, Eric H Y Lau, Benjamin J Cowling, Wan Yang

Open access · goldAbstract read
In one paragraph

Article in PLoS computational biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
5.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 60 citations in OpenAlex.

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  9. Noisy periodicity in tropical respiratory disease dynamics.medRxiv : the preprint server for health sciences · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Haokun YuanDepartment of Epidemiology, Mailman School of Public Health, Columbia University, New York, New York, United States of America.ORCID 0000-0002-0262-3100
Sarah C KramerDepartment of Environmental Health Sciences, Mailman School of Public Health, Columbia University, New York, New York, United States of America.ORCID 0000-0002-6177-2309
Eric H Y LauWorld Health Organization Collaborating Centre for Infectious Disease Epidemiology and Control, School of Public Health, Li Ka Shing Faculty of Medicine, the University of Hong Kong, Hong Kong Special Administrative Region, People's Republic of China.ORCID 0000-0002-6688-9637
Benjamin J CowlingWorld Health Organization Collaborating Centre for Infectious Disease Epidemiology and Control, School of Public Health, Li Ka Shing Faculty of Medicine, the University of Hong Kong, Hong Kong Special Administrative Region, People's Republic of China.ORCID 0000-0002-6297-7154
Wan YangDepartment of Epidemiology, Mailman School of Public Health, Columbia University, New York, New York, United States of America.ORCID 0000-0002-7555-9728
Columbia University · USLaboratory of Data Discovery for Health · HK

Funding

True Metal fac coreP30ES009089 · NIEHS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI MATTHEW S PERZANOWSKI · 1998 to 2026
$44.7M
Supplemental Training in Making Data FAIR and AI/ML ReadyT32ES007322 · NIEHS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI Pam R Factor-Litvak, Allison Kupsco · 2000 to 2026
$12.1M
Interdisciplinary Training in Climate and HealthT32ES023770 · NIEHS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI SHAMAN, JEFFREY L · 2014 to 2019
$1.5M
Inferring Shifts in Susceptibility and Cross Protection to Influenza from (Sub)typed Incidence DataR03AI135926 · NIAID · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI YANG, WAN · 2018 to 2019
$162k
Forecasting International Transmission of Influenza: Development and Validation of a Global ModelF31AI138410 · NIAID · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI KRAMER, SARAH CORINNE · 2019 to 2019
$27k
NIAID NIH HHS F31 AI138410NIAID NIH HHS R03 AI135926NIEHS NIH HHS P30 ES009089NIEHS NIH HHS T32 ES007322NIEHS NIH HHS T32 ES023770
6 · The paper itself

Abstract

Climate drivers such as humidity and temperature may play a key role in influenza seasonal transmission dynamics. Such a relationship has been well defined for temperate regions. However, to date no models capable of capturing the diverse seasonal pattern in tropical and subtropical climates exist. In addition, multiple influenza viruses could cocirculate and shape epidemic dynamics. Here we construct seven mechanistic epidemic models to test the effect of two major climate drivers (humidity and temperature) and multi-strain co-circulation on influenza transmission in Hong Kong, an influenza epidemic center located in the subtropics. Based on model fit to long-term influenza surveillance data from 1998 to 2018, we found that a simple model incorporating the effect of both humidity and temperature best recreated the influenza epidemic patterns observed in Hong Kong. The model quantifies a bimodal effect of absolute humidity on influenza transmission where both low and very high humidity levels facilitate transmission quadratically; the model also quantifies the monotonic but nonlinear relationship with temperature. In addition, model results suggest that, at the population level, a shorter immunity period can approximate the co-circulation of influenza virus (sub)types. The basic reproductive number R0 estimated by the best-fit model is also consistent with laboratory influenza survival and transmission studies under various combinations of humidity and temperature levels. Overall, our study has developed a simple mechanistic model capable of quantifying the impact of climate drivers on influenza transmission in (sub)tropical regions. This model can be applied to improve influenza forecasting in the (sub)tropics in the future.

Indexed as

Models, TheoreticalSeasonsTropical ClimateHong KongHumansInfluenza, Human

Identifiers

PMID34106917
PMCPMC8216520
OpenAlexW3168500592

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.