Evidence map›Paper›PMID 34106828›Full record

ArticleeLife2021

HP1α is a chromatin crosslinker that controls nuclear and mitotic chromosome mechanics.

Amy R Strom, Ronald J Biggs, Edward J Banigan, Xiaotao Wang, Katherine Chiu, Cameron Herman, Jimena Collado, Feng Yue, Joan C Ritland Politz, Leah J Tait and 6 more

Open access · goldAbstract read
In one paragraph

Article in eLife, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 103 papers.

0numbers the graph read from it
0cells of the map it votes in
103citing papers in PubMed
8.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

103 citing papers in PubMed, 147 citations in OpenAlex.

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43 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 5 institutions in 1 country.

Amy R Strom *Howard Hughes Medical Institute, Department of Chemical and Biological Engineering, Princeton University, Princeton, United States.ORCID 0000-0002-1674-3242
Ronald J Biggs *Department of Molecular Biosciences, Northwestern University, Evanston, United States.ORCID 0000-0002-9965-6346
Edward J Banigan *Institute for Medical Engineering and Science and Department of Physics, Massachusetts Institute of Technology, Cambridge, United States.ORCID 0000-0001-5478-7425
Xiaotao WangDepartment of Biochemistry and Molecular Genetics, Feinberg School of Medicine, Northwestern University, Chicago, United States.ORCID 0000-0002-3531-2157
Katherine ChiuBiology Department, University of Massachusetts Amherst, Amherst, United States.
Cameron HermanDepartment of Molecular Biosciences, Northwestern University, Evanston, United States.
Jimena ColladoDepartment of Molecular Biosciences, Northwestern University, Evanston, United States.
Feng YueDepartment of Biochemistry and Molecular Genetics, Feinberg School of Medicine, Northwestern University, Chicago, United States.
Joan C Ritland PolitzThe Fred Hutchinson Cancer Research Center, Seattle, United States.ORCID 0000-0001-5229-0087
Leah J TaitThe Fred Hutchinson Cancer Research Center, Seattle, United States.
David ScalzoThe Fred Hutchinson Cancer Research Center, Seattle, United States.
Agnes TellingThe Fred Hutchinson Cancer Research Center, Seattle, United States.
Mark GroudineThe Fred Hutchinson Cancer Research Center, Seattle, United States.
Clifford P BrangwynneHoward Hughes Medical Institute, Department of Chemical and Biological Engineering, Princeton University, Princeton, United States.ORCID 0000-0002-1350-9960
John F MarkoDepartment of Molecular Biosciences, Northwestern University, Evanston, United States.ORCID 0000-0003-4151-9530
Andrew D StephensBiology Department, University of Massachusetts Amherst, Amherst, United States.ORCID 0000-0001-5474-7845
Northwestern University · USFred Hutch Cancer Center · USAmherst College · USHoward Hughes Medical Institute · USMassachusetts Institute of Technology · US

Funding

Center for 3D Structure and Physics of the GenomeU54DK107980 · NIDDK · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI DEKKER, JOB · 2015 to 2019
$14.9M
Center for 3D Structure and Physics of the GenomeUM1HG011536 · NHGRI · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI DEKKER, JOB, MIRNY, LEONID A · 2020 to 2024
$11.8M
Spatio-Temporal Organization of Chromatin and Information Transfer in CancerU54CA193419 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI O'HALLORAN, THOMAS V · 2015 to 2020
$10.4M
VISION: ValIdated Systematic IntegratiON of epigenomic dataR24DK106766 · NIDDK · PENNSYLVANIA STATE UNIVERSITY, THE · PI BLOBEL, GERD A, BODINE, DAVID M. · 2016 to 2020
$6.2M
Impact of genetic variants on gene regulation and 3D genome organization in human diseasesR35GM124820 · NIGMS · PENNSYLVANIA STATE UNIV HERSHEY MED CTR · PI Feng Yue · 2017 to 2026
$4.0M
Polymer models of mitotic and interphase chromosomesR01GM114190 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI MIRNY, LEONID A · 2015 to 2023
$2.8M
Visualization, modeling and validation of chromatin interaction dataR01HG009906 · NHGRI · PENNSYLVANIA STATE UNIV HERSHEY MED CTR · PI YUE, FENG · 2018 to 2022
$2.0M
The WashU 4DN Network Data Coordination and Integration CenterU01CA200060 · NCI · WASHINGTON UNIVERSITY · PI WANG, TING · 2015 to 2019
$1.9M
A toolkit to reversibly disrupt nuclear bodies and move genes among compartmentsU01DA040583 · NIDA · FRED HUTCHINSON CANCER RESEARCH CENTER · PI GROUDINE, MARK T · 2015 to 2018
$1.7M
Optogenetic Droplets: Using Light to Control Nucleoplasmic Phase SeparationU01DA040601 · NIDA · PRINCETON UNIVERSITY · PI BRANGWYNNE, CLIFFORD P · 2015 to 2019
$1.4M
Analyzing the role of chromatin compaction in nuclear mechanics, structure, and functionR00GM123195 · NIGMS · UNIVERSITY OF MASSACHUSETTS AMHERST · PI STEPHENS, ANDREW DANIEL · 2020 to 2022
$745k
Howard Hughes Medical InstituteNCI NIH HHS U01 CA200060NCI NIH HHS U54 CA193419NHGRI NIH HHS R01 HG009906NHGRI NIH HHS UM1 HG011536NIDA NIH HHS U01 DA040583NIDA NIH HHS U01 DA040601NIDDK NIH HHS R24 DK106766NIDDK NIH HHS U54 DK107980NIGMS NIH HHS R00 GM123195NIGMS NIH HHS R01 GM114190NIGMS NIH HHS R35 GM124820
6 · The paper itself

Abstract

Chromatin, which consists of DNA and associated proteins, contains genetic information and is a mechanical component of the nucleus. Heterochromatic histone methylation controls nucleus and chromosome stiffness, but the contribution of heterochromatin protein HP1α (CBX5) is unknown. We used a novel HP1α auxin-inducible degron human cell line to rapidly degrade HP1α. Degradation did not alter transcription, local chromatin compaction, or histone methylation, but did decrease chromatin stiffness. Single-nucleus micromanipulation reveals that HP1α is essential to chromatin-based mechanics and maintains nuclear morphology, separate from histone methylation. Further experiments with dimerization-deficient HP1α

Indexed as

ChromatinChromosomal Proteins, Non-HistoneChromosomesCell LineCell NucleusChromobox Protein Homolog 5HumansMethylationMitosisCBX5 protein, humanChromatinChromobox Protein Homolog 5Chromosomal Proteins, Non-Histonecell biologychromosomechromosomesgene expressionheterochromatinHP1ahumanmechanicsmitosisnucleus

Identifiers

PMID34106828
PMCPMC8233041
OpenAlexW3170382547

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.