Evidence map›Paper›PMID 34105009›Full record

ArticleMicrobial ecology2022

Distinctive Microbiome Type Distribution in a Young Adult Balinese Cohort May Reflect Environmental Changes Associated with Modernization.

Clarissa A Febinia, Safarina G Malik, Ratna Djuwita, I Wayan Weta, Desak Made Wihandani, Rizka Maulida, Herawati Sudoyo, Andrew J Holmes

Abstract read
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Article in Microbial ecology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact, top 95% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 3 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 2 countries.

Clarissa A FebiniaEijkman Institute for Molecular Biology, National Research and Innovation Agency, Jakarta, Indonesia.
Safarina G MalikEijkman Institute for Molecular Biology, National Research and Innovation Agency, Jakarta, Indonesia.
Ratna DjuwitaDepartment of Epidemiology, Faculty of Public Health, Universitas Indonesia, Depok, Indonesia.
I Wayan WetaDepartment of Public Health and Preventive Medicine / Clinical Nutrition, Faculty of Medicine, Universitas Udayana, Bali, Indonesia.
Desak Made WihandaniDepartment of Biochemistry, Faculty of Medicine, Universitas Udayana, Bali, Indonesia.
Rizka MaulidaDepartment of Epidemiology, Faculty of Public Health, Universitas Indonesia, Depok, Indonesia.
Herawati SudoyoEijkman Institute for Molecular Biology, National Research and Innovation Agency, Jakarta, Indonesia.
Andrew J HolmesSchool of Life and Environmental Science and the Charles Perkins Centre, The University of Sydney, Sydney, NSW, Australia. andrew.holmes@sydney.edu.au.
Eijkman Institute for Molecular Biology · IDUdayana University · IDUniversity of Indonesia · IDNational Research and Innovation AgencyUniversity of Sydney · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

An important public health question is understanding how changes in human environments can drive changes in the gut microbiota that influence risks associated with human health and wellbeing. It is well-documented that the modernization of societies is strongly correlated with intergenerational change in the frequency of nutrition-related chronic diseases in which microbial dysbiosis is implicated. The population of Bali, Indonesia, is well-positioned to study the interconnection between a changing food environment and microbiome patterns in its early stages, because of a recent history of modernization. Here, we characterize the fecal microbiota and diet history of the young adult women in Bali, Indonesia (n = 41) in order to compare microbial patterns in this generation with those of other populations with different histories of a modern food environment (industrialized supply chain). We found strong support for two distinct fecal microbiota community types in our study cohort at similar frequency: a Prevotella-rich (Type-P) and a Bacteroides-rich (Type-B) community (p < 0.001, analysis of similarity, Wilcoxon test). Although Type-P individuals had lower alpha diversity (p < 0.001, Shannon) and higher incidence of obesity, multivariate analyses with diet data showed that community types significantly influenced associations with BMI. In a multi-country dataset (n = 257), we confirmed that microbial beta diversity across subsistent and industrial populations was significantly associated with Prevotella and Bacteroides abundance (p < 0.001, generalized additive model) and that the prevalence of community types differs between societies. The young adult Balinese microbiota was distinctive in having an equal prevalence of two community types. Collectively, our study showed that the incorporation of community types as an explanatory factor into study design or modeling improved the ability to identify microbiome associations with diet and health metrics.

Indexed as

Gastrointestinal MicrobiomeMicrobiotaCohort StudiesDietFecesFemaleHumansYoung AdultBaliCommunity assemblyFecalHeterogeneityLifestyleMicrobiomePopulation

Identifiers

PMID34105009
OpenAlexW3168407482

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.