Evidence map›Paper›PMID 34103512›Full record

ArticleNature communications2021

MOGONET integrates multi-omics data using graph convolutional networks allowing patient classification and biomarker identification.

Tongxin Wang, Wei Shao, Zhi Huang, Haixu Tang, Jie Zhang, Zhengming Ding, Kun Huang

Abstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 295 papers.

0numbers the graph read from it
0cells of the map it votes in
295citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

295 citing papers in PubMed.

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  17. Causal graph neural networks for healthcare.Nature biomedical engineering · 2026
    Review
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235 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Tongxin Wang *Department of Computer Science, Indiana University Bloomington, Bloomington, IN, USA.ORCID 0000-0001-5826-1842
Wei Shao *Department of Medicine, Indiana University School of Medicine, Indianapolis, IN, USA.ORCID 0000-0002-9401-1186
Zhi HuangDepartment of Medicine, Indiana University School of Medicine, Indianapolis, IN, USA.
Haixu TangDepartment of Computer Science, Indiana University Bloomington, Bloomington, IN, USA.
Jie ZhangDepartment of Medical and Molecular Genetics, Indiana University School of Medicine, Indianapolis, IN, USA.ORCID 0000-0001-6939-7905
Zhengming DingDepartment of Computer Science, Tulane University, New Orleans, LA, USA. zding1@tulane.edu.ORCID 0000-0002-6994-5278
Kun HuangDepartment of Medicine, Indiana University School of Medicine, Indianapolis, IN, USA. kunhuang@iu.edu.ORCID 0000-0002-8530-370X

Funding

Structural Biology CoreU54AG065181 · NIA · INDIANA UNIVERSITY INDIANAPOLIS · PI Timothy I Richardson · 2019 to 2026
$61.3M
QuBBD: Geometric Time-Frequency Methods for Multi-modal Physiological MonitoringR01EB025018 · NIBIB · OHIO STATE UNIVERSITY · PI CHI, YUEJIE, HUANG, KUN · 2017 to 2019
$815k
NIA NIH HHS U54 AG065181NIBIB NIH HHS R01 EB025018
6 · The paper itself

Abstract

To fully utilize the advances in omics technologies and achieve a more comprehensive understanding of human diseases, novel computational methods are required for integrative analysis of multiple types of omics data. Here, we present a novel multi-omics integrative method named Multi-Omics Graph cOnvolutional NETworks (MOGONET) for biomedical classification. MOGONET jointly explores omics-specific learning and cross-omics correlation learning for effective multi-omics data classification. We demonstrate that MOGONET outperforms other state-of-the-art supervised multi-omics integrative analysis approaches from different biomedical classification applications using mRNA expression data, DNA methylation data, and microRNA expression data. Furthermore, MOGONET can identify important biomarkers from different omics data types related to the investigated biomedical problems.

Indexed as

AlgorithmsGenomicsAlzheimer DiseaseBiomarkersDatabases, GeneticFemaleHumansBiomarkers

Identifiers

PMID34103512
PMCPMC8187432

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.