Evidence map›Paper›PMID 34102115›Full record

ArticleCurrent biology : CB2021

Unchecked nick ligation can promote localized genome re-replication.

Erik Johansson, John F X Diffley

Open access · hybridAbstract read
In one paragraph

Article in Current biology : CB, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.6field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 2 countries.

Erik JohanssonChromosome Replication Laboratory, The Francis Crick Institute, London NW1 1AT, UK; Department of Medical Biochemistry and Biophysics, Umeå University, 90187 Umeå, Sweden. Electronic address: erik.tm.johansson@umu.se.
John F X DiffleyChromosome Replication Laboratory, The Francis Crick Institute, London NW1 1AT, UK. Electronic address: john.diffley@crick.ac.uk.
The Francis Crick Institute · GBUmeå University · SE

Funding

Cancer Research UK FC001066Medical Research Council FC001066Wellcome Trust 106252/Z/14/ZWellcome Trust FC001066
6 · The paper itself

Abstract

Single-stranded DNA breaks, or nicks, are amongst the most common forms of DNA damage in cells. They can be repaired by ligation; however, if a nick occurs just ahead of an approaching replisome, the outcome is a collapsed replication fork comprising a single-ended double-strand break and a 'hybrid nick' with parental DNA on one side and nascent DNA on the other (Figure 1A). We realized that in eukaryotic cells, where replication initiates from multiple replication origins, a fork from an adjacent origin can promote localized re-replication if the hybrid nick is ligated. We have modelled this situation with purified proteins in vitro and have found that there is, indeed, an additional hazard that eukaryotic replisomes face. We discuss how this problem might be mitigated.

Indexed as

DNA Breaks, Single-StrandedDNA ReplicationReplication OriginDNADNA Breaks, Double-StrandedDNA-Directed DNA PolymeraseDNA LigasesEscherichia coliGenomeMultienzyme ComplexesReplisomesYeastsDNADNA-Directed DNA PolymeraseDNA LigasesMultienzyme ComplexesReplisomes

Identifiers

PMID34102115
PMCPMC8209288
OpenAlexW3167870841

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.