Evidence map›Paper›PMID 34101353›Full record

ArticleMolecular systems biology2021

Neural G0: a quiescent-like state found in neuroepithelial-derived cells and glioma.

Samantha A O'Connor, Heather M Feldman, Sonali Arora, Pia Hoellerbauer, Chad M Toledo, Philip Corrin, Lucas Carter, Megan Kufeld, Hamid Bolouri, Ryan Basom and 7 more

Open access · goldAbstract read
In one paragraph

Article in Molecular systems biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed, 1 pooled it
3.2field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 1 synthesis or guideline pooled it, 48 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 4 institutions in 2 countries.

Samantha A O'ConnorSchool of Biological and Health Systems Engineering, Arizona State University, Tempe, AZ, USA.
Heather M FeldmanHuman Biology Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
Sonali AroraHuman Biology Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
Pia HoellerbauerHuman Biology Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
Chad M ToledoHuman Biology Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
Philip CorrinHuman Biology Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
Lucas CarterHuman Biology Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
Megan KufeldHuman Biology Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
Hamid BolouriHuman Biology Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
Ryan BasomGenomics and Bioinformatics Shared Resources, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
Jeffrey DelrowGenomics and Bioinformatics Shared Resources, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.ORCID 0000-0003-1020-3154
José L McFaline-FigueroaDepartment of Genome Sciences, University of Washington, Seattle, WA, USA.
Cole TrapnellDepartment of Genome Sciences, University of Washington, Seattle, WA, USA.
Steven M PollardEdinburgh CRUK Cancer Research Centre, MRC Centre for Regenerative Medicine, The University of Edinburgh, Edinburgh, UK.
Anoop PatelHuman Biology Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
Patrick J PaddisonHuman Biology Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
Christopher L PlaisierSchool of Biological and Health Systems Engineering, Arizona State University, Tempe, AZ, USA.ORCID 0000-0003-3273-5717
Fred Hutch Cancer Center · USUniversity of Washington · USArizona State University · USMRC Centre for Regenerative Medicine · GB

Funding

Translational Bioimaging Core Shared ResourceP30CA015704 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI Eric Collisson · 1985 to 2026
$296.4M
Interdisciplinary Tranining in Cancer ResearchT32CA080416 · NCI · UNIVERSITY OF WASHINGTON · PI STODDARD, BARRY L. · 1998 to 2023
$9.7M
Chromosome Metabolism and Cancer Training GrantT32CA009657 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI EISENMAN, ROBERT NEIL · 1991 to 2020
$7.6M
Defining cellular states of quiescence in human brain tumorsR01NS119650 · NINDS · FRED HUTCHINSON CANCER RESEARCH CENTER · PI PADDISON, PATRICK · 2021 to 2025
$2.6M
MYC-dependent loss of splicing fidelity in Glioblastoma multiformeR01CA190957 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI PADDISON, PATRICK · 2015 to 2019
$2.2M
Evolution of cancer-specific molecular requirements for glioblastoma multiforme (R21CA170722 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI PADDISON, PATRICK, ZHU, JUN · 2012 to 2013
$418k
Predictable control of gene regulation through epigenetic engineeringR21CA232244 · NCI · EMORY UNIVERSITY · PI HAYNES, KARMELLA ANN · 2019 to 2020
$376k
NCI NIH HHS P30 CA015704NCI NIH HHS R01 CA190957NCI NIH HHS R21 CA170722NCI NIH HHS R21 CA232244NCI NIH HHS T32 CA009657NCI NIH HHS T32 CA080416NINDS NIH HHS R01 NS119650
6 · The paper itself

Abstract

Single-cell RNA sequencing has emerged as a powerful tool for resolving cellular states associated with normal and maligned developmental processes. Here, we used scRNA-seq to examine the cell cycle states of expanding human neural stem cells (hNSCs). From these data, we constructed a cell cycle classifier that identifies traditional cell cycle phases and a putative quiescent-like state in neuroepithelial-derived cell types during mammalian neurogenesis and in gliomas. The Neural G0 markers are enriched with quiescent NSC genes and other neurodevelopmental markers found in non-dividing neural progenitors. Putative glioblastoma stem-like cells were significantly enriched in the Neural G0 cell population. Neural G0 cell populations and gene expression are significantly associated with less aggressive tumors and extended patient survival for gliomas. Genetic screens to identify modulators of Neural G0 revealed that knockout of genes associated with the Hippo/Yap and p53 pathways diminished Neural G0 in vitro, resulting in faster G1 transit, down-regulation of quiescence-associated markers, and loss of Neural G0 gene expression. Thus, Neural G0 represents a dynamic quiescent-like state found in neuroepithelial-derived cells and gliomas.

Indexed as

GlioblastomaNeural Stem CellsAnimalsCell CycleCell DivisionHumansNeurogenesisG0gliomaneural stem cellsquiescencescRNA-seq

Identifiers

PMID34101353
PMCPMC8186478
OpenAlexW3171700225

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.