Evidence map›Paper›PMID 34100175›Full record

ArticleBiochemical genetics2022

Genetic Polymorphism of 24 Autosomal STR in the Population of Rwanda.

Gasana Paul, JunLin Liu, Pan Ma, Abiy Wendifraw Assefa, Jingsi Yang, Shaoqing Li, DongKe Fu, Yan Liu, Rutayisire Gad, Kamuhangire Edward and 3 more

Abstract read
PubMed Publisher
In one paragraph

Article in Biochemical genetics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Gasana Paul *College of Medicine & Forensic, Health Science Center, Xi'an Jiao Tong University, 76 Yan Ta West Road, Xi'an, 710061, Shaanxi, People's Republic of China.
JunLin Liu *College of Medicine & Forensic, Health Science Center, Xi'an Jiao Tong University, 76 Yan Ta West Road, Xi'an, 710061, Shaanxi, People's Republic of China.
Pan MaCollege of Medicine & Forensic, Health Science Center, Xi'an Jiao Tong University, 76 Yan Ta West Road, Xi'an, 710061, Shaanxi, People's Republic of China.
Abiy Wendifraw AssefaCollege of Medicine & Forensic, Health Science Center, Xi'an Jiao Tong University, 76 Yan Ta West Road, Xi'an, 710061, Shaanxi, People's Republic of China.
Jingsi YangCollege of Medicine & Forensic, Health Science Center, Xi'an Jiao Tong University, 76 Yan Ta West Road, Xi'an, 710061, Shaanxi, People's Republic of China.
Shaoqing LiCollege of Medicine & Forensic, Health Science Center, Xi'an Jiao Tong University, 76 Yan Ta West Road, Xi'an, 710061, Shaanxi, People's Republic of China.
DongKe FuShenzhen Key Laboratory of Forensics, BGI-Shenzhen, Shenzhen, 518083, People's Republic of China.
Yan LiuDepartment of Clinical Laboratory, 521 Hospital of Ordnance Industry, Xi'an, 710065, Shaanxi, People's Republic of China.
Rutayisire GadDepartment of Biomedical Laboratory Science, College of Medicine and Health Sciences, University of Rwanda, Kigali, Rwanda.
Kamuhangire EdwardDepartment of Health Service and Quality Assurance, Ministry of Health-Rwanda, Kigali, Rwanda.
Shengbin LiCollege of Medicine & Forensic, Health Science Center, Xi'an Jiao Tong University, 76 Yan Ta West Road, Xi'an, 710061, Shaanxi, People's Republic of China.
Bao ZhangCollege of Medicine & Forensic, Health Science Center, Xi'an Jiao Tong University, 76 Yan Ta West Road, Xi'an, 710061, Shaanxi, People's Republic of China. zhangbao_814@mail.xjtu.edu.cn.ORCID http://orcid.org/0000-0003-0320-2305
Chunxia YanCollege of Medicine & Forensic, Health Science Center, Xi'an Jiao Tong University, 76 Yan Ta West Road, Xi'an, 710061, Shaanxi, People's Republic of China. yanchx@mail.xjtu.edu.cn.

Funding

Fundamental Research Funds for the Central Universities xjj2017135Health Research Fund Project of Shaanxi 2018A010Natural Science Foundation of Shaanxi Province 2017JQ8010
6 · The paper itself

Abstract

Rwanda is one of the smallest countries of Africa, where forensic genetic studies are rarely being conducted and very few DNA databases have been developed. Short tandem repeats (STRs) polymorphisms were investigated in 505 unrelated Rwandese by using the HUMDNA TYPING (Yanhuang) Kit. The following STRs were targeted: D3S1358, D13S317, D7S820, D16S539, SE33, D10S1248, D5S818, D21S11, TPOX, D1S1656, D6S1043, D19S433, D22S1045, D8S1179, Penta E, D2S441, D12S391, D2S1338, vWA, Penta D, TH01, D18S51, CSF1PO and FGA. The purpose of this study was to elucidate the genetic diversity and explore the potential of applying these 24 STR in 505 Rwandan population in forensics. A total of 360 alleles, with corresponding allele frequencies in the range from 0.001 to 0.442, were found in the Rwandan population. SE33 presented the highest polymorphism (PIC=0.921) among these 24 loci, whereas D13S317 presented the lowest one (PIC=0.671). No deviation from the Hardy-Weinberg equilibrium was observed for any of the 24 loci. The forensic parameters, including the combined power of discrimination (PD and the combined exclusion power, have demonstrated that this panel of 24 STRs is highly informative and useful for forensic applications such as individuals' identification and paternity tests. Additionally, the genetic distances between Rwanda population and other 24 published populations were calculated based on 8 overlapping loci with the polygenetic tree revealing significant clusters in the populations associated with their geographic locations and their historical relationship.

Indexed as

Genetics, PopulationMicrosatellite RepeatsDNA FingerprintingGene FrequencyHumansPolymorphism, GeneticRwandaDNA typingHUMDNA TYPING (Yanhuang-PCR)Rwandan populationsShort tandem repeats (STR)Technology acceptance model

Identifiers

PMID34100175

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.