Evidence map›Paper›PMID 34099512›Full record

ArticleThe Journal of neuroscience : the official journal of the Society for Neuroscience2021

Generation and Characterization of a Cell Type-Specific, Inducible Cre-Driver Line to Study Olfactory Processing.

Anzhelika Koldaeva, Cary Zhang, Yu-Pei Huang, Janine Kristin Reinert, Seiya Mizuno, Fumihiro Sugiyama, Satoru Takahashi, Taha Soliman, Hiroaki Matsunami, Izumi Fukunaga

Open access · hybridAbstract read
In one paragraph

Article in The Journal of neuroscience : the official journal of the Society for Neuroscience, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.1field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 11 citations in OpenAlex.

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  7. PKIB, a Novel Target for Cancer Therapy.International journal of molecular sciences · 2024
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Anzhelika KoldaevaSensory and Behavioural Neuroscience Unit, Okinawa Institute of Science and Technology Graduate University, Okinawa, Japan, 904-0495.
Cary ZhangSensory and Behavioural Neuroscience Unit, Okinawa Institute of Science and Technology Graduate University, Okinawa, Japan, 904-0495.
Yu-Pei HuangSensory and Behavioural Neuroscience Unit, Okinawa Institute of Science and Technology Graduate University, Okinawa, Japan, 904-0495.
Janine Kristin ReinertSensory and Behavioural Neuroscience Unit, Okinawa Institute of Science and Technology Graduate University, Okinawa, Japan, 904-0495.
Seiya MizunoLaboratory Animal Resource Center, Tsukuba University, Ibaraki, Japan, 305-8577.
Fumihiro SugiyamaLaboratory Animal Resource Center, Tsukuba University, Ibaraki, Japan, 305-8577.
Satoru TakahashiLaboratory Animal Resource Center, Tsukuba University, Ibaraki, Japan, 305-8577.
Taha SolimanSensory and Behavioural Neuroscience Unit, Okinawa Institute of Science and Technology Graduate University, Okinawa, Japan, 904-0495.ORCID https://orcid.org/0000-0003-3185-3092
Hiroaki MatsunamiDepartment of Molecular Genetics and Microbiology and Department of Neurobiology, Duke University, Durham, North Carolina, 27710.ORCID https://orcid.org/0000-0002-8850-2608
Izumi FukunagaSensory and Behavioural Neuroscience Unit, Okinawa Institute of Science and Technology Graduate University, Okinawa, Japan, 904-0495 Izumi.fukunaga@oist.jp.ORCID https://orcid.org/0000-0003-1860-5377
Okinawa Institute of Science and Technology Graduate University · JPUniversity of Tsukuba · JPDuke University · US

Funding

Biogenesis of olfactory G protein-coupled receptorsR01DC016224 · NIDCD · DUKE UNIVERSITY · PI MATSUNAMI, HIROAKI · 2017 to 2021
$2.2M
NIDCD NIH HHS R01 DC016224
6 · The paper itself

Abstract

In sensory systems of the brain, mechanisms exist to extract distinct features from stimuli to generate a variety of behavioral repertoires. These often correspond to different cell types at various stages in sensory processing. In the mammalian olfactory system, complex information processing starts in the olfactory bulb, whose output is conveyed by mitral cells (MCs) and tufted cells (TCs). Despite many differences between them, and despite the crucial position they occupy in the information hierarchy, Cre-driver lines that distinguish them do not yet exist. Here, we sought to identify genes that are differentially expressed between MCs and TCs of the mouse, with an ultimate goal to generate a cell type-specific Cre-driver line, starting from a transcriptome analysis using a large and publicly available single-cell RNA-seq dataset (Zeisel et al., 2018). Many genes were differentially expressed, but only a few showed consistent expressions in MCs and at the specificity required. After further validating these putative markers using ISH, two genes (i.e.,

Indexed as

Cell LineAnimalsFemaleIntegrasesMaleMiceMice, TransgenicNeuronsOlfactory BulbOlfactory PathwaysOlfactory PerceptionCre recombinaseIntegrasesCRISPRolfactionscRNA-seq

Identifiers

PMID34099512
PMCPMC8318078
OpenAlexW3165959565

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.