Evidence map›Paper›PMID 34098066›Full record

ArticleNeuroImage2021

Deep learning model of fMRI connectivity predicts PTSD symptom trajectories in recent trauma survivors.

Shelly Sheynin, Lior Wolf, Ziv Ben-Zion, Jony Sheynin, Shira Reznik, Jackob Nimrod Keynan, Roee Admon, Arieh Shalev, Talma Hendler, Israel Liberzon

Open access · goldAbstract read
In one paragraph

Article in NeuroImage, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
4.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
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  3. [A study on post-traumatic stress disorder classification based on multi-atlas multi-kernel graph convolutional network].Sheng wu yi xue gong cheng xue za zhi = Journal of biomedical engineering = Shengwu yixue gongchengxue zazhi · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 2 countries.

Shelly SheyninSchool of Computer Science, Tel Aviv University, Tel-Aviv, Israel.
Lior WolfSchool of Computer Science, Tel Aviv University, Tel-Aviv, Israel. Electronic address: liorwolf@gmail.com.
Ziv Ben-ZionSagol Brain Institute Tel-Aviv, Wohl Institute for Advanced Imaging, Tel Aviv Sourasky Medical Center, Tel-Aviv, Israel; Sagol School of Neuroscience, Tel-Aviv University, Tel Aviv, Israel.
Jony SheyninDepartment of Psychiatry and Behavioral Science, Texas A&M University Health Science Center, TX, USA.
Shira ReznikSagol Brain Institute Tel-Aviv, Wohl Institute for Advanced Imaging, Tel Aviv Sourasky Medical Center, Tel-Aviv, Israel.
Jackob Nimrod KeynanSagol Brain Institute Tel-Aviv, Wohl Institute for Advanced Imaging, Tel Aviv Sourasky Medical Center, Tel-Aviv, Israel; Department of Psychiatry and Behavioral Science, Stanford University School of Medicine, Stanford, USA.
Roee AdmonSchool of Psychological Sciences, University of Haifa, Haifa, Israel; The Integrated Brain and Behavior Research Center (IBBRC), University of Haifa, Haifa, Israel.
Arieh ShalevDepartment of Psychiatry, New York University Grossman School of Medicine, New York, NY, USA.
Talma HendlerSagol Brain Institute Tel-Aviv, Wohl Institute for Advanced Imaging, Tel Aviv Sourasky Medical Center, Tel-Aviv, Israel; Sagol School of Neuroscience, Tel-Aviv University, Tel Aviv, Israel; School of Psychological Sciences, Faculty of Social Sciences, Tel-Aviv University, Tel-Aviv, Israel; Sackler Faculty of Medicine, Tel-Aviv University, Tel-Aviv, Israel.
Israel LiberzonDepartment of Psychiatry and Behavioral Science, Texas A&M University Health Science Center, TX, USA.
Tel Aviv Sourasky Medical Center · ILTel Aviv University · ILTexas A&M University · USNew York University · USStanford University · USUniversity of Haifa · IL

Funding

Neurobehavioral Moderators of Post-traumatic Disease TrajectoriesR01MH103287 · NIMH · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI SHALEV, ARIEH Y · 2014 to 2018
$2.7M
NIMH NIH HHS R01 MH103287
6 · The paper itself

Abstract

Early intervention following exposure to a traumatic life event could change the clinical path from the development of post traumatic stress disorder (PTSD) to recovery, hence the interest in early detection and underlying biological mechanisms involved in the development of post traumatic sequelae. We introduce a novel end-to-end neural network that employs resting-state and task-based functional MRI (fMRI) datasets, obtained one month after trauma exposure, to predict PTSD symptoms at one-, six- and fourteen-months after the exposure. FMRI data, as well as PTSD status and symptoms, were collected from adults at risk for PTSD development, after admission to emergency room following a traumatic event. Our computational method utilized a per-region encoder to extract brain regions embedding, which were subsequently updated by applying the algorithmic technique of pairwise attention. The affinities obtained between each pair of regions were combined to create a pairwise co-activation map used to perform multi-label classification. The results demonstrate that the novel method's performance in predicting PTSD symptoms, in a prospective manner, outperforms previous analytical techniques reported in the fMRI literature, all trained on the same dataset. We further show a high predictive ability for predicting PTSD symptom clusters and PTSD persistence. To the best of our knowledge, this is the first deep learning method applied on fMRI data with respect to prospective clinical outcomes, to predict PTSD status, severity and symptom clusters. Future work could further delineate the mechanisms that underlie such a prediction, and potentially improve single patient characterization.

Indexed as

AdultBrainDeep LearningFemaleHumansMagnetic Resonance ImagingMaleNerve NetStress Disorders, Post-TraumaticSurvivorsAttention mechanismDeep learningEnd-to-end neural networkfMRIPTSD symptom clusters

Identifiers

PMID34098066
PMCPMC8350148
OpenAlexW3166216565

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.