Evidence map›Paper›PMID 34097204›Full record

ArticleMolecular biology reports2021

Downregulation of SERINC5 expression in buffy coats of HIV-1-infected patients with detectable or undetectable viral load.

Elsie Guadalupe Hernández-López, Gracia Viviana González-Enríquez, Blanca Miriam Torres-Mendoza, Jhonathan Cárdenas-Bedoya, Martha Escoto-Delgadillo, Eduardo Vázquez-Valls, Alma Minerva Pérez-Ríos, David Alejandro Carbajal-Uribe, Ana Rosa Rincón-Sánchez

Abstract read
PubMed Publisher
In one paragraph

Article in Molecular biology reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.3field-weighted citation impact, top 49% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

  1. Review
  2. SERINC5 counters retroviruses and non-retroviruses.Frontiers in cellular and infection microbiology · 2024
    Review
  3. HIV-1 restriction by SERINC5.Medical microbiology and immunology · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Elsie Guadalupe Hernández-López *Doctorado en Farmacología, Centro Universitario de Ciencias de la Salud, Universidad de Guadalajara, Guadalajara, Jalisco, México.
Gracia Viviana González-Enríquez *Departamento de Disciplinas Filosófico, Metodológicas e Instrumentales, Centro Universitario de Ciencias de la Salud, Universidad de Guadalajara, Guadalajara, Jalisco, México.ORCID http://orcid.org/0000-0002-6551-7508
Blanca Miriam Torres-MendozaDepartamento de Disciplinas Filosófico, Metodológicas e Instrumentales, Centro Universitario de Ciencias de la Salud, Universidad de Guadalajara, Guadalajara, Jalisco, México. bltorres1@hotmail.com.ORCID http://orcid.org/0000-0003-2233-571X
Jhonathan Cárdenas-BedoyaDepartamento de Disciplinas Filosófico, Metodológicas e Instrumentales, Centro Universitario de Ciencias de la Salud, Universidad de Guadalajara, Guadalajara, Jalisco, México.ORCID http://orcid.org/0000-0002-0244-9464
Martha Escoto-DelgadilloLaboratorio de Inmunodeficiencias y Retrovirus Humanos, Centro de Investigación Biomédica de Occidente, Centro Médico Nacional de Occidente, Instituto Mexicano del Seguro Social, Guadalajara, Jalisco, México.ORCID http://orcid.org/0000-0002-4105-4641
Eduardo Vázquez-VallsDirección de Generación de Recursos Profesionales, Investigación Y Desarrollo de la Secretaría de Salud, Jalisco, Guadalajara, Jalisco, México.ORCID http://orcid.org/0000-0002-9639-5339
Alma Minerva Pérez-RíosHospital Regional 110, Instituto Mexicano del Seguro Social, Guadalajara, Jalisco, México.ORCID http://orcid.org/0000-0003-2461-4835
David Alejandro Carbajal-UribeLaboratorio de Inmunodeficiencias y Retrovirus Humanos, Centro de Investigación Biomédica de Occidente, Centro Médico Nacional de Occidente, Instituto Mexicano del Seguro Social, Guadalajara, Jalisco, México.
Ana Rosa Rincón-SánchezDoctorado en Farmacología, Centro Universitario de Ciencias de la Salud, Universidad de Guadalajara, Guadalajara, Jalisco, México.ORCID http://orcid.org/0000-0002-6834-7129
Mexican Social Security Institute · MXUniversidad de Guadalajara · MXSecretaría de Salud de Jalisco · MX

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Among the host restriction factors against HIV, SERINC5 has been described in vitro, but the mRNA level of SERINC5 in vivo has been little studied. We compare SERINC5 expression in subjects with HIV-1 (highly active antiretroviral treatment (HAART) and HAART-naïve) with and without suppression of viral load. A cross-sectional study was performed with 107 individuals distributed as follows: 24 with HAART-naïve and detectable viral load (> 50 copies/mL), 13 with HAART and detectable viral load (> 50 copies/mL), 50 with HAART and undetectable viral load (≤ 50 copies/mL), and 20 without HIV-1. SERINC5 expression in buffy coats was determined using RT-qPCR. The viral load was determined using real-time PCR and the amount of CD4 + and CD8 + T-lymphocytes was measured using flow cytometry. The data were normalized with the Shapiro-Wilk test and the Kruskal-Wallis test was subsequently performed. The relative expression was compared with a T-test and the remaining data with the Mann-Whitney U-test. ANCOVA multiple linear regression analysis was performed between characteristics of patients with SERINC5 expression. The mean and SD of the SERINC5 expression in the three groups with HIV-1 was 0.9 ± 0.2 and without HIV-1 was 1.7 ± 0.14 (P < 0.001). Multiple linear regression did not show the participation of CD4 +, CD8 + , viral load, infection time, or treatment time. No differences in the SERINC5 expression were found among the studied groups of patients with HIV-1. When comparing the groups with and without HIV-1 infection, SERINC5 was downregulation in the HIV-1 groups.

Indexed as

AdolescentAdultAgedAntiretroviral Therapy, Highly ActiveBlood Buffy CoatCD4-Positive T-LymphocytesCD8-Positive T-LymphocytesCross-Sectional StudiesDown-RegulationFemaleHIV-1HIV InfectionsHumansMaleMembrane ProteinsMiddle AgedMembrane ProteinsSERINC5 protein, humanHAARTHIV-1NaïveRestriction factorsSERINC5

Identifiers

PMID34097204
OpenAlexW3166330955

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.