Evidence map›Paper›PMID 34095712›Full record

ArticleJCO precision oncology2021

Pathogenic Germline Variants in Cancer Susceptibility Genes in Children and Young Adults With Rhabdomyosarcoma.

Jung Kim, Nicholas Light, Vallijah Subasri, Erin L Young, Talia Wegman-Ostrosky, Donald A Barkauskas, David Hall, Philip J Lupo, Rajesh Patidar, Luke D Maese and 16 more

Open access · bronzeAbstract read
In one paragraph

Article in JCO precision oncology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
5.1field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 43 citations in OpenAlex.

  1. Article
  2. Review
  3. medRxiv : the preprint server for health sciences · 2026
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  5. Article
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  11. Adult-Onset Cancer Predisposition Syndromes in Children and Adolescents-To Test or not to Test?Clinical cancer research : an official journal of the American Association for Cancer Research · 2024
    Article
  12. Article
  13. Article
  14. Article
  15. A Novel DNA Variant inInternational journal of molecular sciences · 2024
    Article
  16. Review
  17. Article
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  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

26 authors at 9 institutions in 4 countries.

Jung KimClinical Genetics Branch, Division of Cancer Epidemiology and Genetics, National Cancer Institute, Rockville, MD.
Nicholas LightGenetics and Genome Biology Program, The Hospital for Sick Children, Toronto, ON, Canada.
Vallijah SubasriGenetics and Genome Biology Program, The Hospital for Sick Children, Toronto, ON, Canada.
Erin L YoungDepartment of Pediatrics, University of Utah, Salt Lake City, UT.
Talia Wegman-OstroskyClinical Genetics Branch, Division of Cancer Epidemiology and Genetics, National Cancer Institute, Rockville, MD.
Donald A BarkauskasQuadW-COG Childhood Sarcoma Biostatistics and Annotation Office, Children's Oncology Group, Monrovia, CA.
David HallQuadW-COG Childhood Sarcoma Biostatistics and Annotation Office, Children's Oncology Group, Monrovia, CA.
Philip J LupoDepartment of Pediatrics, Hematology-Oncology Section, Baylor College of Medicine, Houston, TX.
Rajesh PatidarGenetics Branch, Center for Cancer Research, National Cancer Institute, Bethesda, MD.
Luke D MaeseDepartment of Pediatrics, University of Utah, Salt Lake City, UT.
Kristine JonesCancer Genomics Research Laboratory, Frederick National Laboratory for Cancer Research, Frederick, MD.
Mingyi WangCancer Genomics Research Laboratory, Frederick National Laboratory for Cancer Research, Frederick, MD.
Sean V TavtigianDepartment of Oncological Sciences, Huntsman Cancer Institute, University of Utah, Salt Lake City, UT.
Dongjing WuCancer Genomics Research Laboratory, Frederick National Laboratory for Cancer Research, Frederick, MD.
Adam ShlienDepartment of Pediatric Laboratory Medicine, The Hospital for Sick Children, Toronto, ON, Canada.
Frank TelferGenetics and Genome Biology Program, The Hospital for Sick Children, Toronto, ON, Canada.
Anna GoldenbergGenetics and Genome Biology Program, The Hospital for Sick Children, Toronto, ON, Canada.
Stephen X SkapekUniversity of Texas Southwestern, Dallas, TX.
Jun S WeiGenetics Branch, Center for Cancer Research, National Cancer Institute, Bethesda, MD.
Xinyu WenGenetics Branch, Center for Cancer Research, National Cancer Institute, Bethesda, MD.
Daniel CatchpooleThe Tumour Bank, Children's Cancer Research Unit, Kids Research Institute, The Children's Hospital at Westmead, Westmead, NSW, Australia.
Douglas S HawkinsDivision of Hematology/Oncology, Seattle Children's Hospital, University of Washington, Fred Hutchinson Cancer Research Center, Seattle, WA.
Joshua D SchiffmanDepartment of Pediatrics, University of Utah, Salt Lake City, UT.
Javed KhanGenetics Branch, Center for Cancer Research, National Cancer Institute, Bethesda, MD.
David MalkinGenetics and Genome Biology Program, The Hospital for Sick Children, Toronto, ON, Canada.
Douglas R StewartClinical Genetics Branch, Division of Cancer Epidemiology and Genetics, National Cancer Institute, Rockville, MD.
University of Toronto · CANational Cancer Institute · USUniversity of Utah · USFrederick National Laboratory for Cancer Research · USSeattle Children's Hospital · USBaylor College of Medicine · USChildren's Hospital at Westmead · AUChildren's Oncology Group · USUniversity of Southern California · US

Funding

NCTN BIQSFP ANBL1531 (NRT)U10CA180886 · NCI · PUBLIC HEALTH INSTITUTE · PI Douglas S. Hawkins · 2014 to 2026
$390.6M
COG FOREIGN ACCRUALU10CA098543 · NCI · NATIONAL CHILDHOOD CANCER FOUNDATION · PI ADAMSON, PETER C. · 2003 to 2013
$335.5M
COG SDMC - Statistics CoreU10CA180899 · NCI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI TODD A ALONZO · 2014 to 2026
$132.8M
Children's Oncology Group Statistics &Data Center GrantU10CA098413 · NCI · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI ANDERSON, JAMES R · 2003 to 2013
$67.5M
COG U24 Funding 2026-2027U24CA196173 · NCI · RESEARCH INST NATIONWIDE CHILDREN'S HOSP · PI Mignon Lee-Cheun Loh, Nilsa Del Carmen Ramirez Milan · 2015 to 2026
$62.5M
Support for Human Specimen Banking in NCI-Supported Cancer Clinical TrialsU24CA114766 · NCI · RESEARCH INST NATIONWIDE CHILDREN'S HOSP · PI RAMIREZ MILAN, NILSA DEL CARMEN · 2005 to 2014
$14.5M
Therapy Resistance Mechanisms for CancerZIABC010998 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI KHAN, JAVED · 2009 to 2025
$14.5M
Targeting FGFR4, RAS, and PAX3-FOXO1 gene in RhabdomyosarcomaZIABC010999 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI KHAN, JAVED · 2009 to 2025
$14.0M
BIOINFORMATICS: SYSTEMS BIOLOGY OF PEDIATRIC CANCERSZIABC011002 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI KHAN, JAVED · 2009 to 2025
$9.3M
Targeting High-risk Neuroblastoma using high through put siRNA screeningZIABC010806 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI KHAN, JAVED · 2009 to 2025
$7.8M
Predicting Response Prognosis in Pediatric CancersZIASC010366 · NCI · DIVISION OF CLINICAL SCIENCES - NCI · PI KHAN, JAVED · 2009 to 2025
$4.7M
NCI NIH HHS U10 CA098413NCI NIH HHS U10 CA098543NCI NIH HHS U10 CA180886NCI NIH HHS U10 CA180899NCI NIH HHS U24 CA114766NCI NIH HHS U24 CA196173
6 · The paper itself

Abstract

Rhabdomyosarcoma (RMS) is the most common pediatric soft-tissue sarcoma and accounts for 3% of all pediatric cancer. In this study, we investigated germline sequence and structural variation in a broad set of genes in two large, independent RMS cohorts. MATERIALS AND

methodsGenome sequencing of the discovery cohort (n = 273) and exome sequencing of the secondary cohort (n = 121) were conducted on germline DNA. Analyses were performed on 130 cancer susceptibility genes (CSG). Pathogenic or likely pathogenic (P/LP) variants were predicted using the American College of Medical Genetics and Genomics (ACMG) criteria. Structural variation and survival analyses were performed on the discovery cohort.

resultsWe found that 6.6%-7.7% of patients with RMS harbored P/LP variants in dominant-acting CSG. An additional approximately 1% have structural variants (

conclusionIn two cohorts of patients with RMS, we identified pathogenic germline variants for which gene-specific therapies and surveillance guidelines may be beneficial. In families with a proband with an RMS-risk P/LP variant, genetic counseling and cascade testing should be considered, especially for ACMG Secondary Findings genes and/or with gene-specific surveillance guidelines.

Indexed as

Genetic Predisposition to DiseaseAdolescentChildChild, PreschoolCohort StudiesFemaleGenetic VariationGerm CellsHumansInfantMaleRhabdomyosarcomaYoung Adult

Identifiers

PMID34095712
PMCPMC8169077
OpenAlexW3118235744

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.