Evidence map›Paper›PMID 34094276›Full record

ArticleChemical science2020

Key aurophilic motif for robust quantum-tunneling-based characterization of a nucleoside analogue marker.

Takafumi Furuhata, Yuki Komoto, Takahito Ohshiro, Masateru Taniguchi, Ryosuke Ueki, Shinsuke Sando

Abstract read
In one paragraph

Article in Chemical science, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Electrical discrimination of lysine methylation states at the single-molecule level.Analytical sciences : the international journal of the Japan Society for Analytical Chemistry · 2026
    Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Takafumi FuruhataDepartment of Chemistry and Biotechnology, Graduate School of Engineering, The University of Tokyo 7-3-1 Hongo, Bunkyo-ku Tokyo 113-8656 Japan ssando@chembio.t.u-tokyo.ac.jp.ORCID https://orcid.org/0000-0003-2950-1426
Yuki KomotoThe Institute of Scientific and Industrial Research, Osaka University 8-1 Mihogaoka, Ibaraki Osaka 567-0047 Japan taniguti@sanken.osaka-u.ac.jp.ORCID https://orcid.org/0000-0002-9004-3797
Takahito OhshiroThe Institute of Scientific and Industrial Research, Osaka University 8-1 Mihogaoka, Ibaraki Osaka 567-0047 Japan taniguti@sanken.osaka-u.ac.jp.
Masateru TaniguchiThe Institute of Scientific and Industrial Research, Osaka University 8-1 Mihogaoka, Ibaraki Osaka 567-0047 Japan taniguti@sanken.osaka-u.ac.jp.ORCID https://orcid.org/0000-0002-0338-8755
Ryosuke UekiDepartment of Chemistry and Biotechnology, Graduate School of Engineering, The University of Tokyo 7-3-1 Hongo, Bunkyo-ku Tokyo 113-8656 Japan ssando@chembio.t.u-tokyo.ac.jp.ORCID https://orcid.org/0000-0002-5433-5354
Shinsuke SandoDepartment of Chemistry and Biotechnology, Graduate School of Engineering, The University of Tokyo 7-3-1 Hongo, Bunkyo-ku Tokyo 113-8656 Japan ssando@chembio.t.u-tokyo.ac.jp.ORCID https://orcid.org/0000-0003-0275-7237

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A quantum sequencer offers a scalable electrical platform for single-molecule analysis of genomic events. A thymidine (dT) analog exhibiting uniquely high single-molecule conductance is a key element in capturing DNA synthesis dynamics by serving as a decodable marker for enzymatic labeling of nascent strands. However, the current design strategies of dT analogs that focus on their molecular orbital energy levels require bulky chemical modifications to extend the π-conjugation, which hinders polymerase recognition. We report herein a polymerase-compatible dT analog that is highly identifiable in quantum sequencing. An ethynyl group is introduced as a small gold-binding motif to differentiate the nucleobase-gold electronic coupling, which has been an overlooked factor in modifying nucleobase conductance. The resulting C5-ethynyl-2'-deoxyuridine exhibits characteristic signal profiles that allowed its correct identification at a 93% rate while maintaining polymerase compatibility. This study would expand the applicability of quantum sequencing by demonstrating a robust nucleoside marker with high identifiability.

Identifiers

PMID34094276
PMCPMC8162310

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.