Evidence map›Paper›PMID 34091784›Full record

ArticleArchives of virology2021

Complete genome sequences of anemone mosaic virus and ranunculus mild mosaic virus isolated from anemone imported from the Netherlands into Japan.

Yuya Imamura, Moritsugu Oishi, Yuji Fujiwara, Hironobu Yanagisawa

Abstract read
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In one paragraph

Article in Archives of virology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.2field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 1 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Yuya ImamuraTsukuba Farm, Yokohama Plant Protection Station, Nagamine, Tsukuba, Ibaraki, 305-0052, Japan.
Moritsugu OishiTsukuba Farm, Yokohama Plant Protection Station, Nagamine, Tsukuba, Ibaraki, 305-0052, Japan.
Yuji FujiwaraTsukuba Farm, Yokohama Plant Protection Station, Nagamine, Tsukuba, Ibaraki, 305-0052, Japan.
Hironobu YanagisawaNarita Branch, Yokohama Plant Protection Station, Aza-Tennamino, Komaino, Narita, Chiba, 282-0021, Japan. hironobu_yanagisa090@maff.go.jp.ORCID http://orcid.org/0000-0002-6729-466X
Japanese Red Cross Narita Hospital · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Anemone mosaic virus (AnMV) and ranunculus mild mosaic virus (RanMMV) infect anemone plants, which exhibit characteristic mosaic patterns on their leaves. Employing next-generation sequencing of plant material imported from the Netherlands, the complete genome sequences of these two viruses were determined for the first time. AnMV and RanMMV have 9698 and 9537 nucleotides (nt), respectively, excluding the poly(A) tail. They share 80.0%/82.0% and 98.0%/97.0% nt/amino acid (aa) sequence identity, which is above the species demarcation value, in the previously reported AnMV and RanMMV coat protein sequences, but they share 69.0%/70.0% nt/aa sequence identity or less with other potyviruses in all 10 mature protein coding regions of the genome. Additionally, phylogenetic analysis confirmed the relationship of the AnMV and RanMMV genome sequences to previously reported partial sequences and placed them within the genus Potyvirus. These results show that these two viruses represent separate species within the genus Potyvirus.

Indexed as

AnemoneGenome, ViralHigh-Throughput Nucleotide SequencingJapanNetherlandsOpen Reading FramesPhylogenyPhylogeographyPotyvirusSequence Homology, Amino AcidWhole Genome Sequencing

Identifiers

PMID34091784
OpenAlexW3166679640

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.