Evidence map›Paper›PMID 34090353›Full record

ArticleBMC microbiology2021

Patterns of yeast diversity distribution and its drivers in rhizosphere soil of Hami melon orchards in different regions of Xinjiang.

ShanShan Zhu, YongHui Lei, Chong Wang, YuMei Wei, ChunCheng Wang, YanFei Sun

Open access · goldAbstract read
In one paragraph

Article in BMC microbiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
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  6. Gut yeast diversity ofFrontiers in microbiology · 2024
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  9. Function-driven design ofFrontiers in microbiology · 2022
    Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

ShanShan Zhu *College of life Science / Xinjiang Production and Construction Corps Key Laboratory of Oasis Town and Mountain-basin System Ecology, North 4 Street, College of life Science, Shihezi University, Shihezi, 832003, People's Republic of China.
YongHui Lei *Department of Plant protection, College of Agriculture, Shihezi University, Shihezi, Xinjiang, 832000, China.
Chong WangUrumqi Customs technique center, Urumqi, 830063, China.
YuMei WeiCollege of life Science / Xinjiang Production and Construction Corps Key Laboratory of Oasis Town and Mountain-basin System Ecology, North 4 Street, College of life Science, Shihezi University, Shihezi, 832003, People's Republic of China.
ChunCheng WangCollege of life Science / Xinjiang Production and Construction Corps Key Laboratory of Oasis Town and Mountain-basin System Ecology, North 4 Street, College of life Science, Shihezi University, Shihezi, 832003, People's Republic of China.
YanFei SunCollege of life Science / Xinjiang Production and Construction Corps Key Laboratory of Oasis Town and Mountain-basin System Ecology, North 4 Street, College of life Science, Shihezi University, Shihezi, 832003, People's Republic of China. 81711308@qq.com.
Xinjiang Production and Construction Corps · CNShihezi University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe unique climatic conditions of the Xinjiang region nurture rich melon and fruit resources, the melon and fruit sugar sources provide sufficient nutrients for the survival of yeast, and the diverse habitats accompanied by extreme climatic conditions promote the production of yeast diversity and strain resources. However, the relationship between yeast species and their relationship with environmental factors in the soil of Xinjiang specialty cash crop Hami melon is not clear. Here, we aimed to characterize the diversity, community structure, and relationship between yeast species and environmental factors in Hami melon orchards soils in different regions of Xinjiang, China.

resultsBased on Illumina MiSeq high-throughput sequencing analysis of the D1 domain of the LSU rRNA genes, the community richness of yeast in the soil of Northern Xinjiang was higher than in the Southern and Eastern Xinjiang, but the community diversity was significantly lower in the Northern Xinjiang than in the Southern and Eastern Xinjiang. A total of 86 OTUs were classified into 59 genera and 86 species. Most OTUs (90.4%) belonged to the Basidiomycota; only a few (9.6%) belonged to Ascomycota. The most dominant species in the Southern, Eastern and Northern Xinjiang were Filobasidium magnum (17.90%), Solicoccozyma aeria (35.83%) and Filobasidium magnum (75.36%), respectively. Principal coordinates analysis (PCoA) showed that the yeast community composition in the soils of the three regions were obviously different, with the Southern and Eastern Xinjiang having more similar yeast community. Redundancy analysis (RDA) showed that soil factors such as conductivity (CO), total phosphorus (TP) and Total potassium (TK) and climate factors such as average annual precipitation (PRCP), relative humidity (RH) and net solar radiation intensity (SWGNT) were significantly correlated with yeast communities (P < 0.05).

conclusionThere are abundant yeast resources in the rhizosphere soil of Hami melon orchard in Xinjiang, and there are obvious differences in the diversity and community structure of yeast in the three regions of Xinjiang. Differences in climatic factors related to precipitation, humidity and solar radiation intensity and soil factors related to conductivity, total phosphorus and total potassium are key factors driving yeast diversity and community structure.

Indexed as

Soil MicrobiologyChinaCucurbitaceaeHigh-Throughput Nucleotide SequencingMicrobiotaPhosphorusRhizosphereSoilYeastsPhosphorusSoilEnvironmental factorsHami melon orchardHigh-throughput sequencingRhizosphere soilYeast diversity

Identifiers

PMID34090353
PMCPMC8180054
OpenAlexW3128091357

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.