Evidence map›Paper›PMID 34089894›Full record

ArticleJournal of proteomics2021

Label-free quantitative proteomic analysis of serum extracellular vesicles differentiating patients of alcoholic and nonalcoholic fatty liver diseases.

Huu-Quang Nguyen, Dabin Lee, Yeoseon Kim, Geul Bang, Kun Cho, Young-Sun Lee, Jong Eun Yeon, David M Lubman, Jeongkwon Kim

Open access · greenAbstract read
In one paragraph

Article in Journal of proteomics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.6field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 33 citations in OpenAlex.

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  13. Liquid Liver Biopsy for Disease Diagnosis and Prognosis.Journal of clinical and translational hepatology · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Huu-Quang NguyenDepartment of Chemistry, Chungnam National University, Daejeon, Republic of Korea.
Dabin LeeDepartment of Chemistry, Chungnam National University, Daejeon, Republic of Korea.
Yeoseon KimDepartment of Chemistry, Chungnam National University, Daejeon, Republic of Korea.
Geul BangResearch Center of Bioconvergence Analysis, Korea Basic Science Institute, Ochang, Republic of Korea.
Kun ChoResearch Center of Bioconvergence Analysis, Korea Basic Science Institute, Ochang, Republic of Korea.
Young-Sun LeeDepartment of Internal Medicine, Korea University College of Medicine, Seoul, Republic of Korea.
Jong Eun YeonDepartment of Internal Medicine, Korea University College of Medicine, Seoul, Republic of Korea.
David M LubmanDepartment of Surgery, University of Michigan Medical Center, Ann Arbor, MI, USA.
Jeongkwon KimDepartment of Chemistry, Chungnam National University, Daejeon, Republic of Korea; Graduate School of New Drug Discovery and Development, Chungnam National University, Daejeon, Republic of Korea. Electronic address: jkkim48105@cnu.ac.kr.
Chungnam National University · KRKorea Basic Science Institute · KRKorea University · KRUniversity of Michigan–Ann Arbor · US

Funding

Supplemental for Detection of Glycopeptides of MCI in Patient SerumR01CA160254 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI David M. Lubman · 2012 to 2026
$5.4M
NCI NIH HHS R01 CA160254
6 · The paper itself

Abstract

Alcoholic liver disease (ALD) and nonalcoholic fatty liver disease (NAFLD) are typically asymptomatic and slow-progressing but potentially fatal diseases that are common causes of liver cirrhosis and related complications. Exosomes are nano-sized extracellular vesicles that have been linked to various intercellular communication processes and can carry biological materials reflecting the state and severity of disease. In this study, shotgun proteomic analysis of the protein expression profiles of extracellular vesicles, including exosomes and microvesicles, enriched from human serum samples of 24 patients diagnosed with various fatty liver diseases was performed using liquid chromatography tandem mass spectrometry (LC-MS/MS) followed by protein identification and label-free quantification using the MaxQuant platform. A total of 329 proteins, including 190 previously reported exosome-specific proteins, were identified from four types of liver disease, where significant differences in protein expression were found in apolipoproteins, immunoglobulins, and other previously reported markers of liver disease. Principal component analysis of 61 proteins identified from MaxQuant analysis of the LC-MS/MS data provided a confident differentiation between ALD and NAFLD. SIGNIFICANCE: The current investigation revealed the difference among various types of liver disease using LC-MS/MS of exosomes enriched from human serum samples of 24 patients where the most significantly up-regulation proteins were alpha-2-macroglobulin for alcoholic hepatitis and apolipoprotein C3 for nonalcoholic fatty liver disease.

Indexed as

Extracellular VesiclesNon-alcoholic Fatty Liver DiseaseChromatography, LiquidHumansProteomicsTandem Mass SpectrometryExosomesExtracellular vesiclesLC-MS/MSLiver diseaseProteomics

Identifiers

PMID34089894
PMCPMC8277700
OpenAlexW3170651901

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.