Evidence map›Paper›PMID 34088839›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2021

Conformation and dynamics of the kinase domain drive subcellular location and activation of LRRK2.

Sven H Schmidt, Jui-Hung Weng, Phillip C Aoto, Daniela Boassa, Sebastian Mathea, Steve Silletti, Junru Hu, Maximilian Wallbott, Elizabeth A Komives, Stefan Knapp and 2 more

Erratum issuedOpen access · hybridAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
9.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 74 citations in OpenAlex.

  1. Chemical Genetic Targeting of the LRRK2 GTPase Domain.bioRxiv : the preprint server for biology · 2026
    Article
  2. Article
  3. ERK autoinhibition mechanism informs a drug combination strategy.Protein science : a publication of the Protein Society · 2026
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  19. Tauopathy in AD: Therapeutic Potential of MARK-4.Current Alzheimer research · 2024
    Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 3 countries.

Sven H SchmidtDepartment of Biochemistry, University of Kassel, 34132 Kassel, Germany.
Jui-Hung WengDepartment of Pharmacology, University of California, San Diego, La Jolla, CA 92093.ORCID 0000-0002-0432-3515
Phillip C AotoDepartment of Pharmacology, University of California, San Diego, La Jolla, CA 92093.ORCID 0000-0001-6518-0899
Daniela BoassaNational Center for Microscopy and Imaging Research, University of California, San Diego, La Jolla, CA 92093.ORCID 0000-0003-4631-4139
Sebastian MatheaInstitute for Pharmaceutical Chemistry, Johann Wolfgang Goethe-University, D-60438 Frankfurt am Main, Germany.
Steve SillettiDepartment of Chemistry and Biochemistry, University of California, San Diego, La Jolla, CA 92093.
Junru HuNational Center for Microscopy and Imaging Research, University of California, San Diego, La Jolla, CA 92093.
Maximilian WallbottDepartment of Biochemistry, University of Kassel, 34132 Kassel, Germany.ORCID 0000-0002-7946-2579
Elizabeth A KomivesDepartment of Chemistry and Biochemistry, University of California, San Diego, La Jolla, CA 92093.ORCID 0000-0001-5264-3866
Stefan KnappInstitute for Pharmaceutical Chemistry, Johann Wolfgang Goethe-University, D-60438 Frankfurt am Main, Germany.ORCID 0000-0001-5995-6494
Friedrich W HerbergDepartment of Biochemistry, University of Kassel, 34132 Kassel, Germany; herberg@uni-kassel.de staylor@ucsd.edu.ORCID 0000-0001-7117-7653
Susan S TaylorDepartment of Pharmacology, University of California, San Diego, La Jolla, CA 92093; herberg@uni-kassel.de staylor@ucsd.edu.
University of California San Diego · USUniversity of Kassel · DEGoethe University Frankfurt · DE

Funding

IVEM and Image Analysis ResourceP41GM103412 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ELLISMAN, MARK H · 2012 to 2019
$17.9M
Contemporary Approaches to Cancer Cell Signaling and CommunicationT32CA009523 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI DONOGHUE, DANIEL J, YANG, JING · 1985 to 2025
$12.1M
New Probe and Methods for Correlated LM & EMR01GM086197 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ADAMS, STEPHEN ROY, BOASSA, DANIELA · 2008 to 2020
$8.3M
National Center for Microscopy and Imaging Research: A BRAIN Technology Integration and Dissemination ResourceU24NS120055 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ELLISMAN, MARK H · 2021 to 2025
$5.4M
The National Center for Microscopy and Imaging Research, a Community-wide Scientific ResourceR24GM137200 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ELLISMAN, MARK H · 2020 to 2022
$3.0M
Synapt G2-S System with HXMS AutomationS10OD016234 · OD · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI KOMIVES, ELIZABETH A. · 2013 to 2013
$600k
NCI NIH HHS T32 CA009523NIGMS NIH HHS P41 GM103412NIGMS NIH HHS R01 GM086197NIGMS NIH HHS R24 GM137200NIH HHS S10 OD016234NINDS NIH HHS U24 NS120055Wellcome Trust
6 · The paper itself

Abstract

To explore how pathogenic mutations of the multidomain leucine-rich repeat kinase 2 (LRRK2) hijack its finely tuned activation process and drive Parkinson's disease (PD), we used a multitiered approach. Most mutations mimic Rab-mediated activation by "unleashing" kinase activity, and many, like the kinase inhibitor MLi-2, trap LRRK2 onto microtubules. Here we mimic activation by simply deleting the inhibitory N-terminal domains and then characterize conformational changes induced by MLi-2 and PD mutations. After confirming that LRRK2

Indexed as

Molecular Dynamics SimulationAmino Acid MotifsHumansHydrogen Deuterium Exchange-Mass SpectrometryLeucine-Rich Repeat Serine-Threonine Protein Kinase-2Protein DomainsProtein TransportLeucine-Rich Repeat Serine-Threonine Protein Kinase-2LRRK2 protein, humanGaussian accelerated molecular dynamicshydrogen-deuterium exchange mass spectrometry (HDX-MS)kinase regulationleucine-rich repeat kinase 2 (LRRK2)Parkinson’s disease

Identifiers

PMID34088839
PMCPMC8201809
OpenAlexW3165747523

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.