Evidence map›Paper›PMID 34083737›Full record

ArticleCommunications biology2021

Comparative analysis of 1152 African-American and European-American men with prostate cancer identifies distinct genomic and immunological differences.

Walter Rayford, Alp Tuna Beksac, Jordan Alger, Mohammed Alshalalfa, Mohsen Ahmed, Irtaza Khan, Ugo G Falagario, Yang Liu, Elai Davicioni, Daniel E Spratt and 22 more

Registry-linked trialOpen access · goldAbstract readComparative StudyMulticenter Study
In one paragraph

Article in Communications biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT02609269 (Prospective Expression Analysis Using The Decipher Genomics Resource for Intelligent Discovery), which is not on this map. Cited by 59 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
59citing papers in PubMed, 3 pooled it
10.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT02609269 enrolling by invitationnot on this map

Prospective Expression Analysis Using The Decipher Genomics Resource for Intelligent Discovery (GRID)® and Data Sharing Program

Typeobservational_patient_registrySponsorGenomeDx Biosciences CorpRan2015 to 2040Enrolled1,000,000ConditionsProstate Cancer, Bladder Cancer, Renal CancerArmsDecipher Cancer Classifier
3 · Its place in the literature

Who cites it

59 citing papers in PubMed, 3 syntheses or guidelines pooled it, 82 citations in OpenAlex.

  1. The Association Between Cadmium Exposure and Prostate Cancer: An Updated Systematic Review and Meta-Analysis.International journal of environmental research and public health · 2024
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  14. PSA bounce: understanding temporal fluctuations in prostate cancer after external radiotherapy.Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

32 authors at 16 institutions in 2 countries.

Walter Rayford *The Urology Group LLC, Memphis, TN, USA.
Alp Tuna Beksac *Department of Urology, Icahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID 0000-0001-6742-0040
Jordan AlgerDepartment of Urology, Medstar Georgetown University Hospital, Washington, DC, USA.
Mohammed AlshalalfaDepartment of Radiation Oncology, University of California San Francisco, San Francisco, CA, USA.ORCID 0000-0001-8405-3035
Mohsen AhmedDepartment of Urology, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Irtaza KhanDepartment of Urology, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Ugo G FalagarioDepartment of Urology, Icahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID 0000-0002-1152-3005
Yang LiuDecipher Biosciences, San Diego, CA, USA.
Elai DavicioniDecipher Biosciences, San Diego, CA, USA.
Daniel E SprattDepartment of Radiation Oncology, University of Michigan, Ann Arbor, MI, USA.
Edward M SchaefferDepartment of Urology, Northwestern University, Chicago, IL, USA.ORCID 0000-0003-0699-1899
Felix Y FengDepartment of Radiation Oncology, University of California San Francisco, San Francisco, CA, USA.ORCID 0000-0002-0963-7687
Brandon MahalDepartment of Radiation Oncology, Brigham and Women's Hospital, Boston, MA, USA.
Paul L NguyenDepartment of Radiation Oncology, Brigham and Women's Hospital, Boston, MA, USA.
Robert B DenDepartment of Radiation Oncology, Thomas Jefferson University, Philadelphia, PA, USA.
Mark D GreenbergerThe Urology Group LLC, Memphis, TN, USA.
Randy BradleyHaslam College of Business, University of Tennessee, Knoxville, TN, USA.
Justin M WatsonWellStar Urology, Marietta, GA, USA.
Matthew BeamerDepartment of Urology, Medstar Georgetown University Hospital, Washington, DC, USA.
Lambros StamatakisDepartment of Urology, Medstar Georgetown University Hospital, Washington, DC, USA.
Darrell J CarmenGeorgia Urology, Atlanta, GA, USA.
Shivanshu AwasthiDepartment of Radiation Oncology, Moffitt Cancer Center, Tampa, FL, USA.ORCID 0000-0003-4175-3212
Jonathan HwangDepartment of Urology, Medstar Georgetown University Hospital, Washington, DC, USA.
Rachel WeilDepartment of Urology, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Harri MerisaariDepartment of Clinical Medicine, University of Turku, Turku, Finland.
Nihal MohamedDepartment of Urology, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Leslie A DeaneDepartment of Urology, Rush University Medical Center, Chicago, IL, USA.
Dimple ChakravartyDepartment of Urology, Icahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID 0000-0002-5021-4440
Kamlesh K YadavSema4, a Mount Sinai venture, Stamford, CT, USA.
Kosj YamoahDepartment of Radiation Oncology, Moffitt Cancer Center, Tampa, FL, USA.ORCID 0000-0001-9055-3538
Sujit S NairDepartment of Urology, Icahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID 0000-0002-3039-523X
Ashutosh K TewariDepartment of Urology, Icahn School of Medicine at Mount Sinai, New York, NY, USA. ash.tewari@mountsinai.org.ORCID 0000-0002-3146-4524
Icahn School of Medicine at Mount Sinai · USGeorgetown University · USBrigham and Women's Hospital · USCoherus BioSciences (United States) · USMoffitt Cancer Center · USRegional Urology · USUniversity of California, San Francisco · USGeorgia Urology · USKnoxville College · USNorthwestern University · USRush University Medical Center · USSema4 (United States) · USThomas Jefferson University · USUniversity of Michigan · USUniversity of Turku · FIWellStar Health System · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Racial disparities in prostate cancer have not been well characterized on a genomic level. Here we show the results of a multi-institutional retrospective analysis of 1,152 patients (596 African-American men (AAM) and 556 European-American men (EAM)) who underwent radical prostatectomy. Comparative analyses between the race groups were conducted at the clinical, genomic, pathway, molecular subtype, and prognostic levels. The EAM group had increased ERG (P < 0.001) and ETS (P = 0.02) expression, decreased SPINK1 expression (P < 0.001), and basal-like (P < 0.001) molecular subtypes. After adjusting for confounders, the AAM group was associated with higher expression of CRYBB2, GSTM3, and inflammation genes (IL33, IFNG, CCL4, CD3, ICOSLG), and lower expression of mismatch repair genes (MSH2, MSH6) (p < 0.001 for all). At the pathway level, the AAM group had higher expression of genes sets related to the immune response, apoptosis, hypoxia, and reactive oxygen species. EAM group was associated with higher levels of fatty acid metabolism, DNA repair, and WNT/beta-catenin signaling. Based on cell lines data, AAM were predicted to have higher potential response to DNA damage. In conclusion, biological characteristics of prostate tumor were substantially different in AAM when compared to EAM.

Indexed as

Gene Expression Regulation, NeoplasticAgedBlack or African AmericanGene Expression ProfilingGenomicsHealth Status DisparitiesHumansImmune SystemMaleMiddle AgedNeoplasm StagingPrognosisProstatic NeoplasmsRetrospective StudiesUnited StatesWhite People

Identifiers

PMID34083737
PMCPMC8175556
OpenAlexW3164968470

What OpenQuestion holds

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LicenceCC BY
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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.