Evidence map›Paper›PMID 34083726›Full record

ArticleCommunications biology2021

Novel lamprey antibody recognizes terminal sulfated galactose epitopes on mammalian glycoproteins.

Tanya R McKitrick, Steffen M Bernard, Alexander J Noll, Bernard C Collins, Christoffer K Goth, Alyssa M McQuillan, Jamie Heimburg-Molinaro, Brantley R Herrin, Ian A Wilson, Max D Cooper and 1 more

Open access · goldAbstract read
In one paragraph

Article in Communications biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 27 citations in OpenAlex.

  1. Protein O-Glycosylation Shapes Lymphatic Endothelia and Lymph Node Macrophage Populations.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2026
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  13. 3'-sulfated LewisFrontiers in cell and developmental biology · 2023
    Review
  14. Synthetic nanobodies as tools to distinguish IgG Fc glycoforms.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  15. Article
  16. Computationally guided conversion of the specificity of E-selectin to mimic that of Siglec-8.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 2 countries.

Tanya R McKitrick *Department of Surgery, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, MA, USA.ORCID 0000-0002-1312-6089
Steffen M Bernard *Department of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, CA, USA.
Alexander J Noll *Department of Surgery, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, MA, USA.
Bernard C CollinsDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, CA, USA.
Christoffer K GothDepartment of Surgery, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, MA, USA.ORCID 0000-0002-5766-1411
Alyssa M McQuillanDepartment of Surgery, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, MA, USA.
Jamie Heimburg-MolinaroDepartment of Surgery, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, MA, USA.
Brantley R HerrinDepartment of Pathology and Laboratory Medicine, Emory Vaccine Center, Emory University School of Medicine, Atlanta, GA, USA.
Ian A WilsonDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, CA, USA.ORCID 0000-0002-6469-2419
Max D CooperDepartment of Pathology and Laboratory Medicine, Emory Vaccine Center, Emory University School of Medicine, Atlanta, GA, USA.ORCID 0000-0003-0887-8785
Richard D CummingsDepartment of Surgery, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, MA, USA. rcummin1@bidmc.harvard.edu.ORCID 0000-0002-8918-5034
Beth Israel Deaconess Medical Center · USScripps Research Institute · USEmory University · USNaval Medical Research Command · USUniversity of Copenhagen · DK

Funding

User Training & OutreachP30GM138396 · NIGMS · UCHICAGO ARGONNE, LLC · PI JANET L. SMITH · 2020 to 2026
$34.3M
X-ray Absorption Spectroscopy (XAS) pp.711-759P41GM103393 · NIGMS · STANFORD UNIVERSITY · PI HODGSON, KEITH O · 2012 to 2019
$30.6M
Characterization of the Lamprey Adaptive Immune SystemR01AI072435 · NIAID · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI Max Dale Cooper · 2007 to 2026
$8.1M
Overall Priority Score P41GM103694 · NIGMS · EMORY UNIVERSITY · PI CUMMINGS, RICHARD D · 2013 to 2018
$6.9M
Training a New Generation of VaccinologistsT32AI074492 · NIAID · EMORY UNIVERSITY · PI Rama Rao Amara, Benjamin A Lopman · 2009 to 2026
$6.4M
Protein-Glycan Interaction Resource at the National Center for Functional Glycomics (NCFG)R24GM137763 · NIGMS · BETH ISRAEL DEACONESS MEDICAL CENTER · PI RICHARD D CUMMINGS · 2020 to 2026
$5.8M
Structural basis of TLR and NLR recognition and signalingR01AI042266 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI WILSON, IAN A · 1998 to 2017
$3.7M
Smart Anti-Glycan Reagents to Generate the Human Glycome Atlas-SupplementU01CA199882 · NCI · BETH ISRAEL DEACONESS MEDICAL CENTER · PI CUMMINGS, RICHARD D, MERNAUGH, RAYMOND L · 2015 to 2017
$2.0M
Novel Carbohydrate-binding Antibodies to Human Glycans Using the Lamprey SystemR01GM140201 · NIGMS · BETH ISRAEL DEACONESS MEDICAL CENTER · PI CUMMINGS, RICHARD D · 2021 to 2023
$1.5M
NCI NIH HHS U01 CA199882NIAID NIH HHS R01 AI042266NIAID NIH HHS R01 AI072435NIAID NIH HHS T32 AI074492NIGMS NIH HHS P30 GM138396NIGMS NIH HHS P41 GM103393NIGMS NIH HHS P41 GM103694NIGMS NIH HHS R01 GM140201NIGMS NIH HHS R24 GM137763
6 · The paper itself

Abstract

The terminal galactose residues of N- and O-glycans in animal glycoproteins are often sialylated and/or fucosylated, but sulfation, such as 3-O-sulfated galactose (3-O-SGal), represents an additional, but poorly understood modification. To this end, we have developed a novel sea lamprey variable lymphocyte receptor (VLR) termed O6 to explore 3-O-SGal expression. O6 was engineered as a recombinant murine IgG chimera and its specificity and affinity to the 3-O-SGal epitope was defined using a variety of approaches, including glycan and glycoprotein microarray analyses, isothermal calorimetry, ligand-bound crystal structure, FACS, and immunohistochemistry of human tissue macroarrays. 3-O-SGal is expressed on N-glycans of many plasma and tissue glycoproteins, but recognition by O6 is often masked by sialic acid and thus exposed by treatment with neuraminidase. O6 recognizes many human tissues, consistent with expression of the cognate sulfotransferases (GAL3ST-2 and GAL3ST-3). The availability of O6 for exploring 3-O-SGal expression could lead to new biomarkers for disease and aid in understanding the functional roles of terminal modifications of glycans and relationships between terminal sulfation, sialylation and fucosylation.

Indexed as

Amino Acid SequenceAnimalsCHO CellsCricetinaeCricetulusEpitopesFucoseGalactoseGlycoproteinsGlycosylationHEK293 CellsHumansLampreysLigandsMass SpectrometryN-Acetylneuraminic Acid3-O-sulfogalactoseEpitopesFucoseGalactoseGlycoproteinsLigandsN-Acetylneuraminic AcidPolysaccharidesSulfatesSulfotransferases

Identifiers

PMID34083726
PMCPMC8175384
OpenAlexW3165784277

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.