Evidence map›Paper›PMID 34083715›Full record

ArticleCommunications biology2021

A multiscale 3D chemotaxis assay reveals bacterial navigation mechanisms.

Marianne Grognot, Katja M Taute

Abstract read
In one paragraph

Article in Communications biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed.

  1. Article
  2. ZnbioRxiv : the preprint server for biology · 2026
    Article
  3. Article
  4. Article
  5. Structure and signaling mechanism ofbioRxiv : the preprint server for biology · 2026
    Article
  6. Cell-body curvature modulates stall frequency to enhancebioRxiv : the preprint server for biology · 2026
    Article
  7. Article
  8. Review
  9. The E. coli escape wave in response to external ZnBiometals : an international journal on the role of metal ions in biology, biochemistry, and medicine · 2025
    Article
  10. Article
  11. Review
  12. Surface conversion of the dynamics of bacteria escaping chemorepellents.The European physical journal. E, Soft matter · 2024
    Article
  13. Review
  14. Review
  15. Article
  16. Physiological adaptation in flagellar architecture improvesProceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  17. Article
  18. Eukaryotic catecholamine hormones influence the chemotactic control ofProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Marianne GrognotRowland Institute at Harvard University, Cambridge, MA, USA.ORCID 0000-0002-7491-1224
Katja M TauteRowland Institute at Harvard University, Cambridge, MA, USA. taute@rowland.harvard.edu.ORCID 0000-0003-2230-717X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

How motile bacteria navigate environmental chemical gradients has implications ranging from health to climate science, but the underlying behavioral mechanisms are unknown for most species. The well-studied navigation strategy of Escherichia coli forms a powerful paradigm that is widely assumed to translate to other bacterial species. This assumption is rarely tested because of a lack of techniques capable of bridging scales from individual navigation behavior to the resulting population-level chemotactic performance. Here, we present such a multiscale 3D chemotaxis assay by combining high-throughput 3D bacterial tracking with microfluidically created chemical gradients. Large datasets of 3D trajectories yield the statistical power required to assess chemotactic performance at the population level, while simultaneously resolving the underlying 3D navigation behavior for every individual. We demonstrate that surface effects confound typical 2D chemotaxis assays, and reveal that, contrary to previous reports, Caulobacter crescentus breaks with the E. coli paradigm.

Indexed as

AlgorithmsModels, BiologicalCaulobacter crescentusChemotaxisEscherichia coliHigh-Throughput Screening AssaysMicrofluidic Analytical TechniquesSpecies Specificity

Identifiers

PMID34083715
PMCPMC8175578

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.