Evidence map›Paper›PMID 34081964›Full record

ArticleThe Journal of biological chemistry2021

Heterodimer formation with retinoic acid receptor RXRα modulates coactivator recruitment by peroxisome proliferator-activated receptor PPARγ.

Whitney Kilu, Daniel Merk, Dieter Steinhilber, Ewgenij Proschak, Jan Heering

Open access · goldAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed, 1 pooled it
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 1 synthesis or guideline pooled it, 32 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Whitney KiluInstitute of Pharmaceutical Chemistry, Goethe University Frankfurt, Frankfurt, Germany.
Daniel MerkInstitute of Pharmaceutical Chemistry, Goethe University Frankfurt, Frankfurt, Germany.
Dieter SteinhilberInstitute of Pharmaceutical Chemistry, Goethe University Frankfurt, Frankfurt, Germany; Assay development and screening, Fraunhofer Institute for Translational Medicine and Pharmacology ITMP, Frankfurt, Germany.
Ewgenij ProschakInstitute of Pharmaceutical Chemistry, Goethe University Frankfurt, Frankfurt, Germany; Assay development and screening, Fraunhofer Institute for Translational Medicine and Pharmacology ITMP, Frankfurt, Germany.
Jan HeeringAssay development and screening, Fraunhofer Institute for Translational Medicine and Pharmacology ITMP, Frankfurt, Germany. Electronic address: Jan.Heering@itmp.fraunhofer.de.
Goethe University Frankfurt · DEFraunhofer Institute for Translational Medicine and Pharmacology · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nuclear receptors (NRs) activate transcription of target genes in response to binding of ligands to their ligand-binding domains (LBDs). Typically, in vitro assays use either gene expression or the recruitment of coactivators to the isolated LBD of the NR of interest to measure NR activation. However, this approach ignores that NRs function as homo- as well as heterodimers and that the LBD harbors the main dimerization interface. Cofactor recruitment is thereby interconnected with oligomerization status as well as ligand occupation of the partnering LBD through allosteric cross talk. Here we present a modular set of homogeneous time-resolved FRET-based assays through which we investigated the activation of PPARγ in response to ligands and the formation of heterodimers with its obligatory partner RXRα. We introduced mutations into the RXRα LBD that prevent coactivator binding but do not interfere with LBD dimerization or ligand binding. This enabled us to specifically detect PPARγ coactivator recruitment to PPARγ:RXRα heterodimers. We found that the RXRα agonist SR11237 destabilized the RXRα homodimer but promoted formation of the PPARγ:RXRα heterodimer, while being inactive on PPARγ itself. Of interest, incorporation of PPARγ into the heterodimer resulted in a substantial gain in affinity for coactivator CBP-1, even in the absence of ligands. Consequently, SR11237 indirectly promoted coactivator binding to PPARγ by shifting the oligomerization preference of RXRα toward PPARγ:RXRα heterodimer formation. These results emphasize that investigation of ligand-dependent NR activation should take NR dimerization into account. We envision these assays as the necessary assay tool kit for investigating NRs that partner with RXRα.

Indexed as

Protein MultimerizationBenzoatesCREB-Binding ProteinHEK293 CellsHumansLigandsMutationNuclear Receptor Coactivator 1PPAR gammaProtein DomainsProtein StabilityReproducibility of ResultsRetinoidsRetinoid X Receptor alphaRosiglitazoneTranscriptional ActivationBenzoatesCREB-Binding ProteinLigandsNuclear Receptor Coactivator 1PPAR gammaRetinoidsRetinoid X Receptor alphaRosiglitazoneSR 11237allosterycofactor recruitmentdrug targetheterodimerhomodimerhomogeneous time-resolved FRET (HTRF)PPARγRXRα

Identifiers

PMID34081964
PMCPMC8258697
OpenAlexW3164380022

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.