Evidence map›Paper›PMID 34081780›Full record

ArticleJournal of neurochemistry2021

Who's in, who's out? Re-evaluation of lipid raft residents.

Kristina Mlinac-Jerkovic, Katarina Ilic, Milorad Zjalić, Dario Mandić, Željko Debeljak, Marta Balog, Vladimir Damjanović, Nikolina Maček Hrvat, Nikola Habek, Svjetlana Kalanj-Bognar and 2 more

Open access · greenAbstract read
In one paragraph

Article in Journal of neurochemistry, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Gangliosides in molecular interactions and cell regulation.The Journal of biological chemistry · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 2 countries.

Kristina Mlinac-JerkovicCroatian Institute for Brain Research, School of Medicine, University of Zagreb, Zagreb, Croatia.ORCID 0000-0002-4309-5447
Katarina IlicCroatian Institute for Brain Research, School of Medicine, University of Zagreb, Zagreb, Croatia.ORCID 0000-0002-8995-6396
Milorad ZjalićDepartment of Medical Biology and Genetics, Faculty of Medicine, University of Osijek, Osijek, Croatia.ORCID 0000-0003-4076-2942
Dario MandićClinical Institute of Laboratory Diagnostics, Osijek University Hospital, Osijek, Croatia.ORCID 0000-0002-3792-4384
Željko DebeljakClinical Institute of Laboratory Diagnostics, Osijek University Hospital, Osijek, Croatia.ORCID 0000-0002-1789-5387
Marta BalogDepartment of Medical Biology and Genetics, Faculty of Medicine, University of Osijek, Osijek, Croatia.ORCID 0000-0002-7842-4781
Vladimir DamjanovićDepartment of Chemistry and Biochemistry, School of Medicine, University of Zagreb, Zagreb, Croatia.ORCID 0000-0002-0560-6867
Nikolina Maček HrvatBiochemistry and Organic Analytical Chemistry Unit, Institute for Medical Research and Occupational Health, Zagreb, Croatia.ORCID 0000-0003-1682-8999
Nikola HabekCroatian Institute for Brain Research, School of Medicine, University of Zagreb, Zagreb, Croatia.ORCID 0000-0002-7774-7386
Svjetlana Kalanj-BognarCroatian Institute for Brain Research, School of Medicine, University of Zagreb, Zagreb, Croatia.ORCID 0000-0002-5713-4910
Ronald L SchnaarDepartments of Pharmacology and Neuroscience, Johns Hopkins University School of Medicine, Baltimore, MD, USA.ORCID 0000-0002-7701-5484
Marija HefferDepartment of Medical Biology and Genetics, Faculty of Medicine, University of Osijek, Osijek, Croatia.ORCID 0000-0001-6770-7359
University of Zagreb · HRUniversity of Osijek · HRKlinički bolnički centar Osijek · HRInstitute for Medical Research and Occupational Health · HRJohns Hopkins University · US

Funding

Ganglioside interactome toolkitU01CA241953 · NCI · JOHNS HOPKINS UNIVERSITY · PI SCHNAAR, RONALD L · 2019 to 2021
$1.5M
NCI NIH HHS U01 CA241953
6 · The paper itself

Abstract

Lipid rafts, membrane microdomains enriched with (glyco)sphingolipids, cholesterol, and select proteins, act as cellular signalosomes. Various methods have been used to separate lipid rafts from bulk (non-raft) membranes, but most often, non-ionic detergent Triton X-100 has been used in their isolation. However, Triton X-100 is a reported disruptor of lipid rafts. Histological evidence confirmed raft disruption by Triton X-100, but remarkably revealed raft stability to treatment with a related polyethylene oxide detergent, Brij O20. We report isolation of detergent-resistant membranes from mouse brain using Brij O20 and its use to determine the distribution of major mammalian brain gangliosides, GM1, GD1a, GD1b and GT1b. A different distribution of gangliosides-classically used as a raft marker-was discovered using Brij O20 versus Triton X-100. Immunohistochemistry and imaging mass spectrometry confirm the results. Use of Brij O20 results in a distinctive membrane distribution of gangliosides that is not all lipid raft associated, but depends on the ganglioside structure. This is the first report of a significant proportion of gangliosides outside raft domains. We also determined the distribution of proteins functionally related to neuroplasticity and known to be affected by ganglioside environment, glutamate receptor subunit 2, amyloid precursor protein and neuroplastin and report the lipid raft populations of these proteins in mouse brain tissue. This work will enable more accurate lipid raft analysis with respect to glycosphingolipid and membrane protein composition and lead to improved resolution of lipid-protein interactions within biological membranes.

Indexed as

AnimalsCholesterolFemaleGangliosidesMaleMembrane GlycoproteinsMembrane MicrodomainsMiceMice, Inbred C57BLSpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationSphingolipidsCholesterolGangliosidesMembrane GlycoproteinsSphingolipidsamyloid precursor proteindetergent-resistant membranesglutamate receptor subunit 2glycosphingolipidsneuroplastin

Identifiers

PMID34081780
PMCPMC8363533
OpenAlexW3165479521

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.