Evidence map›Paper›PMID 34081182›Full record

ArticleCurrent microbiology2021

Phylogenomic Analyses of a Clade Within the Family Flavobacteriaceae Suggest Taxonomic Reassignments of Species of the Genera Algibacter, Hyunsoonleella, Jejuia, and Flavivirga, and the Proposal of Pseudalgibacter gen. nov. and Pseudalgibacter alginicilyticus comb. nov.

Miao Li, Ling-Zhi Hou, Xing-Hao Xu, Xiao-Xiao Wang, Ming-Can Zheng, Yan-Jiao Zhang, Ang Liu

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Article in Current microbiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
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  4. Review
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  7. Frontiers in microbiology · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Miao LiDepartment of Pathogenic Biology, College of Basic Medicine, Jining Medical University, Jining, 272067, Shandong, People's Republic of China.
Ling-Zhi HouDepartment of Pathogenic Biology, College of Basic Medicine, Jining Medical University, Jining, 272067, Shandong, People's Republic of China.
Xing-Hao XuDepartment of Pathogenic Biology, College of Basic Medicine, Jining Medical University, Jining, 272067, Shandong, People's Republic of China.
Xiao-Xiao WangDepartment of Pathogenic Biology, College of Basic Medicine, Jining Medical University, Jining, 272067, Shandong, People's Republic of China.
Ming-Can ZhengDepartment of Pathogenic Biology, College of Basic Medicine, Jining Medical University, Jining, 272067, Shandong, People's Republic of China.
Yan-Jiao ZhangShandong Province Key Laboratory of Applied Mycology, School of Life Sciences, Qingdao Agricultural University, Qingdao, 266109, People's Republic of China.
Ang LiuDepartment of Pathogenic Biology, College of Basic Medicine, Jining Medical University, Jining, 272067, Shandong, People's Republic of China. liuang@mail.jnmc.edu.cn.ORCID http://orcid.org/0000-0001-9167-848X

Funding

National Undergraduate Training Program for Innovation and Entrepreneurship 20180443012
6 · The paper itself

Abstract

The family Flavobacteriaceae forms a major branch within the phylum Bacteroidetes. Whole-genome sequence-based analysis could significantly improve the accuracy of taxonomic assignments. In this study, phylogenomic analyses were carried out to revisit the taxonomic status of a clade of the family Flavobacteriaceae. Taking genome-based phylogeny as the primary guideline and average amino acid identity and phenotypic information as supplements, the following taxonomic proposals were put forward: Arenitalea lutea should be reclassified into the genus Algibacter; Algibacter aquaticus should be reclassified into the genus Flavivirga; Jejuia pallidilutea and Algibacter aestuarii should be reclassified into the genus Hyunsoonleella; Algibacter alginicilyticus should be reclassified into the novel genus Pseudalgibacter gen. nov. This study builds up a solid framework for taxonomic decisions of a clade of the family Flavobacteriaceae and will contribute to further insights into the evolution of this family.

Indexed as

FlavobacteriaceaeSeawaterBacterial Typing TechniquesBase CompositionDNA, BacterialFatty AcidsPhylogenyRNA, Ribosomal, 16SSequence Analysis, DNADNA, BacterialFatty AcidsRNA, Ribosomal, 16S

Identifiers

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.