Evidence map›Paper›PMID 34080906›Full record

ArticleMicrobiology resource announcements2021

Metagenome Sequencing to Explore Phylogenomics of Terrestrial Cyanobacteria.

Ryan D Ward, Jason E Stajich, Jeffrey R Johansen, Marcel Huntemann, Alicia Clum, Brian Foster, Bryce Foster, Simon Roux, Krishnaveni Palaniappan, Neha Varghese and 10 more

Abstract read
In one paragraph

Article in Microbiology resource announcements, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Article
  2. Article
  3. Current research in microbial sciences · 2026
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Microorganisms · 2023
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors.

Ryan D WardPlant and Environmental Sciences Department, New Mexico State University, Las Cruces, New Mexico, USA.
Jason E StajichDepartment of Microbiology and Plant Pathology, University of California, Riverside, Riverside, California, USA.
Jeffrey R JohansenDepartment of Biology, John Carroll University, University Heights, Ohio, USA.
Marcel HuntemannDepartment of Energy Joint Genome Institute, Berkeley, California, USA.
Alicia ClumDepartment of Energy Joint Genome Institute, Berkeley, California, USA.
Brian FosterDepartment of Energy Joint Genome Institute, Berkeley, California, USA.
Bryce FosterDepartment of Energy Joint Genome Institute, Berkeley, California, USA.
Simon RouxDepartment of Energy Joint Genome Institute, Berkeley, California, USA.
Krishnaveni PalaniappanDepartment of Energy Joint Genome Institute, Berkeley, California, USA.
Neha VargheseDepartment of Energy Joint Genome Institute, Berkeley, California, USA.
Supratim MukherjeeDepartment of Energy Joint Genome Institute, Berkeley, California, USA.
T B K ReddyDepartment of Energy Joint Genome Institute, Berkeley, California, USA.
Chris DaumDepartment of Energy Joint Genome Institute, Berkeley, California, USA.
Alex CopelandDepartment of Energy Joint Genome Institute, Berkeley, California, USA.
I-M A ChenDepartment of Energy Joint Genome Institute, Berkeley, California, USA.
Natalia N IvanovaDepartment of Energy Joint Genome Institute, Berkeley, California, USA.
Nikos C KyrpidesDepartment of Energy Joint Genome Institute, Berkeley, California, USA.
Nicole ShapiroDepartment of Energy Joint Genome Institute, Berkeley, California, USA.
Emiley A Eloe-FadroshDepartment of Energy Joint Genome Institute, Berkeley, California, USA.
Nicole PietrasiakPlant and Environmental Sciences Department, New Mexico State University, Las Cruces, New Mexico, USA.

Funding

PREDOCTORAL TRAINING PROGRAM IN GENETICST32GM007133 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI PERNA, NICOLE T · 1985 to 2023
$16.5M
Acquisition of a Scalable Storage Cluster for Data Intensive NIH ResearchS10OD016290 · OD · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI GIRKE, THOMAS · 2014 to 2014
$593k
Joshua Tree National Park Association (JTNPA) Robert Lee Graduate Student Research GrantNational Science Foundation (NSF) DEB-0842702National Science Foundation (NSF) NSF DEB-1441715NIGMS NIH HHS T32 GM007133NIH HHS S10 OD016290Phycological Society of America (PSA) Grant in Aid of ResearchThe Community Foundation, Riverside California Desert Research FundU.S. Department of Agriculture (USDA) CA-R-PPA-5062-HU.S. Department of Energy (DOE) CSP 503837U.S. Department of Energy (DOE) DE-AC02-05CH11231
6 · The paper itself

Abstract

Cyanobacteria are ubiquitous microorganisms with crucial ecosystem functions, yet most knowledge of their biology relates to aquatic taxa. We have constructed metagenomes for 50 taxonomically well-characterized terrestrial cyanobacterial cultures. These data will support phylogenomic studies of evolutionary relationships and gene content among these unique algae and their aquatic relatives.

Identifiers

PMID34080906
PMCPMC8354539

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.