Evidence map›Paper›PMID 34080898›Full record

ArticleMicrobiology resource announcements2021

Closing Clostridium botulinum Group III Genomes Using Long-Read Sequencing.

Cedric Woudstra, Tommi Mäklin, Yagmur Derman, Luca Bano, Hanna Skarin, Christelle Mazuet, Antti Honkela, Miia Lindström

Open access · diamondAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Microbiology resource announcements, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 4 countries.

Cedric WoudstraDepartment of Food Hygiene and Environmental Health, University of Helsinki, Helsinki, Finland.
Tommi MäklinDepartment of Mathematics and Statistics, University of Helsinki, Helsinki, Finland.
Yagmur DermanDepartment of Food Hygiene and Environmental Health, University of Helsinki, Helsinki, Finland.
Luca BanoMicrobiology Laboratory, Istituto Zooprofiilattico Sperimentale delle Venezie, Villorba, Italy.
Hanna SkarinNational Veterinary Institute, Uppsala, Sweden.
Christelle MazuetNational Reference Center for Anaerobic Bacteria and Botulism, Institut Pasteur, Paris, France.
Antti HonkelaDepartment of Computer Science, University of Helsinki, Helsinki, Finland.
Miia LindströmDepartment of Food Hygiene and Environmental Health, University of Helsinki, Helsinki, Finland.
University of Helsinki · FIInstitut Pasteur · FRIstituto Zooprofilattico Sperimentale delle Venezie · ITStatistics Finland · FISwedish Veterinary Agency · SE

Funding

Animal Health and Welfare ERA-Net (ANIHWA) ANIBOTNETEC | H2020 | H2020 Priority Excellent Science | H2020 European Research Council (ERC) 683099
6 · The paper itself

Abstract

Clostridium botulinum group III is the anaerobic Gram-positive bacterium producing the deadly neurotoxin responsible for animal botulism. Here, we used long-read sequencing to produce four complete genomes from Clostridium botulinum group III neurotoxin types C, D, C/D, and D/C. The protocol for obtaining high-molecular-weight DNA from C. botulinum group III is described.

Identifiers

PMID34080898
PMCPMC8354527
OpenAlexW3164218403

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.