Evidence map›Paper›PMID 34079956›Full record

ArticleNature cancer2020

The proliferative history shapes the DNA methylome of B-cell tumors and predicts clinical outcome.

Martí Duran-Ferrer, Guillem Clot, Ferran Nadeu, Renée Beekman, Tycho Baumann, Jessica Nordlund, Yanara Marincevic-Zuniga, Gudmar Lönnerholm, Alfredo Rivas-Delgado, Silvia Martín and 22 more

Open access · greenAbstract read
In one paragraph

Article in Nature cancer, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 62 papers.

0numbers the graph read from it
0cells of the map it votes in
62citing papers in PubMed
6.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

62 citing papers in PubMed, 102 citations in OpenAlex.

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2 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

32 authors at 13 institutions in 6 countries.

Martí Duran-FerrerInstitut d'Investigacions Biomèdiques August Pi i Sunyer (IDIBAPS), Barcelona, Spain. maduran@clinic.cat.ORCID http://orcid.org/0000-0003-1666-5819
Guillem ClotInstitut d'Investigacions Biomèdiques August Pi i Sunyer (IDIBAPS), Barcelona, Spain.
Ferran NadeuInstitut d'Investigacions Biomèdiques August Pi i Sunyer (IDIBAPS), Barcelona, Spain.ORCID http://orcid.org/0000-0003-2910-9440
Renée BeekmanInstitut d'Investigacions Biomèdiques August Pi i Sunyer (IDIBAPS), Barcelona, Spain.
Tycho BaumannCentro de Investigación Biomédica en Red de Cáncer, CIBERONC, Madrid, Spain.
Jessica NordlundDepartment of Medical Sciences, Molecular Medicine and Science for Life Laboratory, Uppsala University, Uppsala, Sweden.
Yanara Marincevic-ZunigaDepartment of Medical Sciences, Molecular Medicine and Science for Life Laboratory, Uppsala University, Uppsala, Sweden.
Gudmar LönnerholmDepartment of Women's and Children's Health, Pediatrics, Uppsala University, Uppsala, Sweden.
Alfredo Rivas-DelgadoInstitut d'Investigacions Biomèdiques August Pi i Sunyer (IDIBAPS), Barcelona, Spain.ORCID http://orcid.org/0000-0003-0385-3415
Silvia MartínInstitut d'Investigacions Biomèdiques August Pi i Sunyer (IDIBAPS), Barcelona, Spain.
Raquel OrdoñezCentro de Investigación Biomédica en Red de Cáncer, CIBERONC, Madrid, Spain.
Giancarlo CastellanoInstitut d'Investigacions Biomèdiques August Pi i Sunyer (IDIBAPS), Barcelona, Spain.
Marta KulisInstitut d'Investigacions Biomèdiques August Pi i Sunyer (IDIBAPS), Barcelona, Spain.
Ana C QueirósInstitut d'Investigacions Biomèdiques August Pi i Sunyer (IDIBAPS), Barcelona, Spain.
Seung-Tae LeeDepartment of Laboratory Medicine, Yonsei University College of Medicine, Seoul, Korea.
Joseph WiemelsCenter for Genetic Epidemiology, University of Southern California, Los Angeles, CA, USA.
Romina RoyoPrograma Conjunto de Biología Computacional, Barcelona Supercomputing Center (BSC), Institut de Recerca Biomèdica (IRB), Spanish National Bioinformatics Institute, Universitat de Barcelona, Barcelona, Spain.
Montserrat PuiggrósPrograma Conjunto de Biología Computacional, Barcelona Supercomputing Center (BSC), Institut de Recerca Biomèdica (IRB), Spanish National Bioinformatics Institute, Universitat de Barcelona, Barcelona, Spain.ORCID http://orcid.org/0000-0001-5034-7924
Junyan LuEuropean Molecular Biology Laboratory (EMBL), Heidelberg, Germany.
Eva GinéInstitut d'Investigacions Biomèdiques August Pi i Sunyer (IDIBAPS), Barcelona, Spain.
Sílvia BeàInstitut d'Investigacions Biomèdiques August Pi i Sunyer (IDIBAPS), Barcelona, Spain.
Pedro JaresInstitut d'Investigacions Biomèdiques August Pi i Sunyer (IDIBAPS), Barcelona, Spain.ORCID http://orcid.org/0000-0002-8401-579X
Xabier AgirreCentro de Investigación Biomédica en Red de Cáncer, CIBERONC, Madrid, Spain.ORCID http://orcid.org/0000-0002-6558-9560
Felipe ProsperCentro de Investigación Biomédica en Red de Cáncer, CIBERONC, Madrid, Spain.
Carlos López-OtínCentro de Investigación Biomédica en Red de Cáncer, CIBERONC, Madrid, Spain.ORCID http://orcid.org/0000-0001-6964-1904
Xosé S PuenteCentro de Investigación Biomédica en Red de Cáncer, CIBERONC, Madrid, Spain.ORCID http://orcid.org/0000-0001-9525-1483
Christopher C OakesDivision of Hematology, Department of Internal Medicine, The Ohio State University, Columbus, OH, USA.
Thorsten ZenzDivision of Hematology, Department of Internal Medicine, The Ohio State University, Columbus, OH, USA.ORCID http://orcid.org/0000-0001-7890-9845
Julio DelgadoInstitut d'Investigacions Biomèdiques August Pi i Sunyer (IDIBAPS), Barcelona, Spain.
Armando López-GuillermoInstitut d'Investigacions Biomèdiques August Pi i Sunyer (IDIBAPS), Barcelona, Spain.
Elías CampoInstitut d'Investigacions Biomèdiques August Pi i Sunyer (IDIBAPS), Barcelona, Spain.ORCID http://orcid.org/0000-0001-9850-9793
José Ignacio Martín-SuberoInstitut d'Investigacions Biomèdiques August Pi i Sunyer (IDIBAPS), Barcelona, Spain. imartins@clinic.cat.ORCID http://orcid.org/0000-0001-8809-5195
Centro de Investigación Biomédica en Red de Cáncer · ESHospital Clínic de Barcelona · ESConsorci Institut D'Investigacions Biomediques August Pi I Sunyer · ESUppsala University · SEBarcelona Supercomputing Center · ESUniversidad de Oviedo · ESClinica Universidad de Navarra · ESEuropean Molecular Biology Laboratory · DEInstitució Catalana de Recerca i Estudis Avançats · ESThe Ohio State University · USUniversity Hospital of Zurich · CHUniversity of Southern California · USYonsei University · KR

Funding

Preclinical Models and Therapeutics CoreP01CA229100 · NCI · MAYO CLINIC ARIZONA · PI SCOTT, DAVID WILLIAM · 2018 to 2022
$10.2M
NCI NIH HHS P01 CA229100
6 · The paper itself

Abstract

We report a systematic analysis of the DNA methylation variability in 1,595 samples of normal cell subpopulations and 14 tumor subtypes spanning the entire human B-cell lineage. Differential methylation among tumor entities relates to differences in cellular origin and to

Indexed as

EpigenomeNeoplasmsDNA MethylationEpigenesis, GeneticGene Expression Regulation, NeoplasticHumans

Identifiers

PMID34079956
PMCPMC8168619
OpenAlexW3097796274

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.