Evidence map›Paper›PMID 34079839›Full record

ArticleComputing in cardiology2020

A Convolutional Neural Network-based Deformable Image Registration Method for Cardiac Motion Estimation from Cine Cardiac MR Images.

Roshan Reddy Upendra, Brian Jamison Wentz, Suzanne M Shontz, Cristian A Linte

Open access · bronzeAbstract read
In one paragraph

Article in Computing in cardiology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.3field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Review
  3. Deformable Image Registration Using Vision Transformers for Cardiac Motion Estimation from Cine Cardiac MRI Images.Functional imaging and modeling of the heart : ... International Workshop, FIMH ..., proceedings. FIMH (Conference) · 2023
    Article
  4. Motion Extraction of the Right Ventricle from 4D Cardiac Cine MRI Using A Deep Learning-Based Deformable Registration Framework.Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference · 2021
    Article
  5. CNN-Based Cardiac Motion Extraction to Generate Deformable Geometric Left Ventricle Myocardial Models from Cine MRI.Functional imaging and modeling of the heart : ... International Workshop, FIMH ..., proceedings. FIMH (Conference) · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 2 countries.

Roshan Reddy UpendraChester F Carlson Center for Imaging Science, Rochester Institute of Technology, Rochester, NY, USA.
Brian Jamison WentzBioengineering Graduate Program, University of Kansas, Lawrence, KS, USA.
Suzanne M ShontzBioengineering Graduate Program, University of Kansas, Lawrence, KS, USA.
Cristian A LinteChester F Carlson Center for Imaging Science, Rochester Institute of Technology, Rochester, NY, USA.
Rochester Institute of Technology · USBioengineering Center · RUUniversity of Kansas · US

Funding

Biomedical Computing and Visualization Tools for Computer-integrated Diagnostic and Therapeutic Data ScienceR35GM128877 · NIGMS · ROCHESTER INSTITUTE OF TECHNOLOGY · PI Cristian A Linte · 2018 to 2026
$2.9M
NIGMS NIH HHS R35 GM128877
6 · The paper itself

Abstract

In this work, we describe an unsupervised deep learning framework featuring a Laplacian-based operator as smoothing loss for deformable registration of 3D cine cardiac magnetic resonance (CMR) images. Before registration, the input 3D images are corrected for slice misalignment by segmenting the left ventricle (LV) blood-pool, LV myocardium and right ventricle (RV) blood-pool using a U-Net model and aligning the 2D slices along the center of the LV blood-pool. We conducted experiments using the Automated Cardiac Diagnosis Challenge (ACDC) dataset. We used the registration deformation field to warp the manually segmented LV blood-pool, LV myocardium and RV blood-pool labels from end-diastole (ED) frame to the other frames in the cardiac cycle. We achieved a mean Dice score of 94.84%, 85.22% and 84.36%, and Hausdorff distance (HD) of 2.74 mm, 5.88 mm and 9.04 mm, for the LV blood-pool, LV myocardium and RV blood-pool, respectively. We also introduce a pipeline to estimate patient tractography using the proposed CNN-based cardiac motion estimation.

Identifiers

PMID34079839
PMCPMC8168986
OpenAlexW3118530804

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.