Evidence map›Paper›PMID 34079596›Full record

ArticleOncology letters2021

Immune-related gene expression signatures in colorectal cancer.

Zhenqing Sun, Wei Xia, Yali Lyu, Yanan Song, Min Wang, Ruirui Zhang, Guode Sui, Zhenlu Li, Li Song, Changliang Wu and 4 more

Open access · greenAbstract read
In one paragraph

Article in Oncology letters, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.1field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 16 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 2 countries.

Zhenqing SunDepartment of Gastrointestinal Surgery, The Affiliated Hospital of Qingdao University, Qingdao, Shandong 266000, P.R. China.
Wei XiaDepartment of Nuclear Medicine, The Seventh People's Hospital, Shanghai University of Traditional Chinese Medicine, Shanghai 200137, P.R. China.
Yali LyuR&D Department, Huaxia Bangfu Technology Incorporated, Beijing 100000, P.R. China.
Yanan SongDepartment of Nuclear Medicine, The Seventh People's Hospital, Shanghai University of Traditional Chinese Medicine, Shanghai 200137, P.R. China.
Min WangR&D Department, Huaxia Bangfu Technology Incorporated, Beijing 100000, P.R. China.
Ruirui ZhangR&D Department, Huaxia Bangfu Technology Incorporated, Beijing 100000, P.R. China.
Guode SuiDepartment of General Surgery, The Affiliated Hospital of Qingdao University, Qingdao, Shandong 266000, P.R. China.
Zhenlu LiDepartment of General Surgery, The Affiliated Hospital of Qingdao University, Qingdao, Shandong 266000, P.R. China.
Li SongDepartment of General Surgery, The Affiliated Hospital of Qingdao University, Qingdao, Shandong 266000, P.R. China.
Changliang WuDepartment of General Surgery, The Affiliated Hospital of Qingdao University, Qingdao, Shandong 266000, P.R. China.
Choong-Chin LiewGolden Health Diagnostics Inc., Yan Cheng, Jiangsu 224000, P.R. China.
Lei YuR&D Department, Huaxia Bangfu Technology Incorporated, Beijing 100000, P.R. China.
Guang ChengDepartment of Gastrointestinal Surgery, The Affiliated Hospital of Qingdao University, Qingdao, Shandong 266000, P.R. China.
Changming ChengR&D Department, Huaxia Bangfu Technology Incorporated, Beijing 100000, P.R. China.
Shanghai University of Traditional Chinese Medicine · CNAffiliated Hospital of Qingdao University · CNHarvard University · USQingdao University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The immune system is crucial in regulating colorectal cancer (CRC) tumorigenesis. Identification of immune-related transcriptomic signatures derived from the peripheral blood of patients with CRC would provide insights into CRC pathogenesis, and suggest novel clues to potential immunotherapy strategies for the disease. The present study collected blood samples from 59 patients with CRC and 62 healthy control patients and performed whole blood gene expression profiling using microarray hybridization. Immune-related gene expression signatures for CRC were identified from immune gene datasets, and an algorithmic predictive model was constructed for distinguishing CRC from controls. Model performance was characterized using an area under the receiver operating characteristic curve (ROC AUC). Functional categories for CRC-specific gene expression signatures were determined using gene set enrichment analyses. A Kaplan-Meier plotter survival analysis was also performed for CRC-specific immune genes in order to characterize the association between gene expression and CRC prognosis. The present study identified five CRC-specific immune genes [protein phosphatase 3 regulatory subunit Bα (

Indexed as

adaptive immune responsecolorectal cancerimmune analysisperipheral bloodtranscriptome

Identifiers

PMID34079596
PMCPMC8157333
OpenAlexW3163018211

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.