Evidence map›Paper›PMID 34079037›Full record

SynthesisCommunications biology2021

Eleven genomic loci affect plasma levels of chronic inflammation marker soluble urokinase-type plasminogen activator receptor.

Joseph Dowsett, Egil Ferkingstad, Line Jee Hartmann Rasmussen, Lise Wegner Thørner, Magnús K Magnússon, Karen Sugden, Gudmar Thorleifsson, Mike Frigge, Kristoffer Sølvsten Burgdorf, Sisse Rye Ostrowski and 20 more

Open access · goldAbstract readMeta-AnalysisTwin StudyValidation Study
In one paragraph

Synthesis in Communications biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 1 pooled it
1.4field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 1 synthesis or guideline pooled it, 21 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. Article
  6. Cohort Profile: The Danish Blood Donor Study.International journal of epidemiology · 2023
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. suPAR, a Circulating Kidney Disease Factor.Frontiers in medicine · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

30 authors at 10 institutions in 6 countries.

Joseph DowsettDepartment of Clinical Immunology, Copenhagen University Hospital, Copenhagen, Denmark. joseph.dowsett@regionh.dk.ORCID 0000-0001-5381-2633
Egil FerkingstaddeCODE genetics/Amgen Inc., Reykjavik, Iceland.ORCID 0000-0001-8090-7988
Line Jee Hartmann RasmussenDepartment of Psychology and Neuroscience, Duke University, Durham, NC, USA.
Lise Wegner ThørnerDepartment of Clinical Immunology, Copenhagen University Hospital, Copenhagen, Denmark.
Magnús K MagnússondeCODE genetics/Amgen Inc., Reykjavik, Iceland.ORCID 0000-0001-8593-4934
Karen SugdenDepartment of Psychology and Neuroscience, Duke University, Durham, NC, USA.
Gudmar ThorleifssondeCODE genetics/Amgen Inc., Reykjavik, Iceland.
Mike FriggedeCODE genetics/Amgen Inc., Reykjavik, Iceland.ORCID 0000-0003-2984-535X
Kristoffer Sølvsten BurgdorfDepartment of Clinical Immunology, Copenhagen University Hospital, Copenhagen, Denmark.
Sisse Rye OstrowskiDepartment of Clinical Immunology, Copenhagen University Hospital, Copenhagen, Denmark.ORCID 0000-0001-5288-3851
Erik SørensenDepartment of Clinical Immunology, Copenhagen University Hospital, Copenhagen, Denmark.
Christian ErikstrupDepartment of Immunology, Aarhus University Hospital, Aarhus, Denmark.ORCID 0000-0001-6551-6647
Ole Birger PedersenDepartment of Immunology, Naestved Hospital, Naestved, Denmark.ORCID 0000-0003-2312-5976
Thomas Folkmann HansenDanish Headache Center, Copenhagen University Hospital, Rigshospitalet Glostrup, Glostrup, Denmark.ORCID 0000-0001-6703-7762
Karina BanasikNovo Nordisk Foundation Center for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark.ORCID 0000-0003-2489-2499
Søren BrunakNovo Nordisk Foundation Center for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark.ORCID 0000-0003-0316-5866
DBDS Genomic Consortium
Vinicius TragantedeCODE genetics/Amgen Inc., Reykjavik, Iceland.ORCID 0000-0002-8223-8957
Sigrun Helga LunddeCODE genetics/Amgen Inc., Reykjavik, Iceland.ORCID 0000-0002-3806-2296
Lilja StefansdottirdeCODE genetics/Amgen Inc., Reykjavik, Iceland.
Bjarni GunnarsondeCODE genetics/Amgen Inc., Reykjavik, Iceland.
Richie PoultonDunedin Multidisciplinary Health and Development Research Unit, Department of Psychology, University of Otago, Dunedin, New Zealand.ORCID 0000-0002-1052-4583
Louise ArseneaultSocial, Genetic, and Developmental Psychiatry Centre, Institute of Psychiatry, Psychology, and Neuroscience, King's College London, London, UK.ORCID 0000-0002-2938-2191
Avshalom CaspiDepartment of Psychology and Neuroscience, Duke University, Durham, NC, USA.
Terrie E MoffittDepartment of Psychology and Neuroscience, Duke University, Durham, NC, USA.
Daníel GudbjartssondeCODE genetics/Amgen Inc., Reykjavik, Iceland.ORCID 0000-0002-5222-9857
Jesper Eugen-OlsenDepartment of Clinical Research, Copenhagen University Hospital Amager and Hvidovre, Hvidovre, Denmark.
Hreinn StefánssondeCODE genetics/Amgen Inc., Reykjavik, Iceland.
Kári StefánssondeCODE genetics/Amgen Inc., Reykjavik, Iceland.ORCID 0000-0003-1676-864X
Henrik UllumDepartment of Clinical Immunology, Copenhagen University Hospital, Copenhagen, Denmark.
deCODE Genetics (Iceland) · ISCopenhagen University Hospital · DKDuke University · USUniversity of Copenhagen · DKUniversity of Iceland · ISAarhus University · DKAarhus University Hospital · DKCopenhagen Business School · DKNæstved Sygehus · DKOdense University Hospital · DK

Funding

Is mental disorder a preventable cause of age-related disease? The Dunedin Study.R01AG032282 · NIA · DUKE UNIVERSITY · PI CASPI, AVSHALOM, MOFFITT, TERRIE E · 2009 to 2025
$9.5M
Neuropsychological and genomic signatures of violence exposure in childhoodR01HD077482 · NICHD · DUKE UNIVERSITY · PI CASPI, AVSHALOM · 2013 to 2018
$2.8M
Medical Research Council G1002190Medical Research Council MR/P005918/1NIA NIH HHS R01 AG032282NICHD NIH HHS R01 HD077482
6 · The paper itself

Abstract

Soluble urokinase-type plasminogen activator receptor (suPAR) is a chronic inflammation marker associated with the development of a range of diseases, including cancer and cardiovascular disease. The genetics of suPAR remain unexplored but may shed light on the biology of the marker and its connection to outcomes. We report a heritability estimate of 60% for the variation in suPAR and performed a genome-wide association meta-analysis on suPAR levels measured in Iceland (N = 35,559) and in Denmark (N = 12,177). We identified 13 independently genome-wide significant sequence variants associated with suPAR across 11 distinct loci. Associated variants were found in and around genes encoding uPAR (PLAUR), its ligand uPA (PLAU), the kidney-disease-associated gene PLA2R1 as well as genes with relations to glycosylation, glycoprotein biosynthesis, and the immune response. These findings provide new insight into the causes of variation in suPAR plasma levels, which may clarify suPAR's potential role in associated diseases, as well as the underlying mechanisms that give suPAR its prognostic value as a unique marker of chronic inflammation.

Indexed as

AdolescentAdultBiomarkersChromosome MappingCohort StudiesC-Reactive ProteinFemaleGenome-Wide Association StudyHumansInflammation MediatorsMaleMultifactorial InheritancePolymorphism, Single NucleotideQuantitative Trait, HeritableReceptors, Urokinase Plasminogen ActivatorBiomarkersC-Reactive ProteinInflammation MediatorsPLAUR protein, humanReceptors, Urokinase Plasminogen Activator

Identifiers

PMID34079037
PMCPMC8172928
OpenAlexW3165878471

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.