Evidence map›Paper›PMID 34078993›Full record

ArticleScientific reports2021

Reproducibility of CT-based radiomic features against image resampling and perturbations for tumour and healthy kidney in renal cancer patients.

Margherita Mottola, Stephan Ursprung, Leonardo Rundo, Lorena Escudero Sanchez, Tobias Klatte, Iosif Mendichovszky, Grant D Stewart, Evis Sala, Alessandro Bevilacqua

Abstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Margherita Mottola *Department of Electrical, Electronic, and Information Engineering (DEI), University of Bologna, 40136, Bologna, Italy.
Stephan UrsprungDepartment of Radiology, University of Cambridge, Cambridge, CB2 0QQ, UK.
Leonardo RundoDepartment of Radiology, University of Cambridge, Cambridge, CB2 0QQ, UK.
Lorena Escudero SanchezDepartment of Radiology, University of Cambridge, Cambridge, CB2 0QQ, UK.
Tobias KlatteDepartment of Surgery, University of Cambridge, Cambridge, CB2 0QQ, UK.
Iosif MendichovszkyDepartment of Radiology, University of Cambridge, Cambridge, CB2 0QQ, UK.
Grant D StewartCancer Research UK Cambridge Centre, University of Cambridge, Cambridge, CB2 0RE, UK.
Evis SalaDepartment of Radiology, University of Cambridge, Cambridge, CB2 0QQ, UK.
Alessandro Bevilacqua *Advanced Research Center on Electronic Systems (ARCES), University of Bologna, 40125, Bologna, Italy. alessandro.bevilacqua@unibo.it.

Funding

Cancer Research UK 28667Cancer Research UK C42780/A27066Cancer Research UK C9685/A25177Wellcome Trust RG98755
6 · The paper itself

Abstract

Computed Tomography (CT) is widely used in oncology for morphological evaluation and diagnosis, commonly through visual assessments, often exploiting semi-automatic tools as well. Well-established automatic methods for quantitative imaging offer the opportunity to enrich the radiologist interpretation with a large number of radiomic features, which need to be highly reproducible to be used reliably in clinical practice. This study investigates feature reproducibility against noise, varying resolutions and segmentations (achieved by perturbing the regions of interest), in a CT dataset with heterogeneous voxel size of 98 renal cell carcinomas (RCCs) and 93 contralateral normal kidneys (CK). In particular, first order (FO) and second order texture features based on both 2D and 3D grey level co-occurrence matrices (GLCMs) were considered. Moreover, this study carries out a comparative analysis of three of the most commonly used interpolation methods, which need to be selected before any resampling procedure. Results showed that the Lanczos interpolation is the most effective at preserving original information in resampling, where the median slice resolution coupled with the native slice spacing allows the best reproducibility, with 94.6% and 87.7% of features, in RCC and CK, respectively. GLCMs show their maximum reproducibility when used at short distances.

Indexed as

AlgorithmsCarcinoma, Renal CellHumansImage Processing, Computer-AssistedKidneyKidney NeoplasmsReproducibility of ResultsTomography, X-Ray Computed

Identifiers

PMID34078993
PMCPMC8172898

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.