Evidence map›Paper›PMID 34077555›Full record

ArticleJournal of neurochemistry2021

Phosphorylation-dependent control of Activity-regulated cytoskeleton-associated protein (Arc) protein by TNIK.

Alicyia Walczyk-Mooradally, Jennifer Holborn, Karamjeet Singh, Marshall Tyler, Debasis Patnaik, Hendrik Wesseling, Nicholas J Brandon, Judith Steen, Steffen P Graether, Stephen J Haggarty and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of neurochemistry, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
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  4. Review
  5. Biomedicines · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 4 countries.

Alicyia Walczyk-MooradallyDepartment of Molecular and Cellular Biology, University of Guelph, Guelph, ON, Canada.ORCID 0000-0003-4336-9329
Jennifer HolbornDepartment of Molecular and Cellular Biology, University of Guelph, Guelph, ON, Canada.ORCID 0000-0001-7370-8016
Karamjeet SinghDepartment of Molecular and Cellular Biology, University of Guelph, Guelph, ON, Canada.
Marshall TylerMassachusetts General Hospital, Centre for Genomic Medicine, Boston, MA, USA.
Debasis PatnaikMassachusetts General Hospital, Centre for Genomic Medicine, Boston, MA, USA.ORCID 0000-0002-9829-3352
Hendrik WesselingBoston Children's Hospital, F.M. Kirby Center for Neurobiology, Harvard Medical School, Boston, MA, USA.
Nicholas J BrandonNeuroscience, BioPharmaceuticals R&D, AstraZeneca Boston, Waltham, MA, USA.ORCID 0000-0002-3917-0096
Judith SteenBoston Children's Hospital, F.M. Kirby Center for Neurobiology, Harvard Medical School, Boston, MA, USA.
Steffen P GraetherDepartment of Molecular and Cellular Biology, University of Guelph, Guelph, ON, Canada.ORCID 0000-0002-2356-3936
Stephen J HaggartyMassachusetts General Hospital, Centre for Genomic Medicine, Boston, MA, USA.ORCID 0000-0002-7872-168X
Jasmin LalondeDepartment of Molecular and Cellular Biology, University of Guelph, Guelph, ON, Canada.ORCID 0000-0002-6797-1894
University of Guelph · CAMassachusetts General Hospital · USBoston Children's Hospital · USAstraZeneca (South Korea) · KR

Funding

Genetic Analysis and Manipulation Core (GAEC)P50HD105351 · NICHD · BOSTON CHILDREN'S HOSPITAL · PI SCOTT Loren POMEROY, MUSTAFA SAHIN · 2021 to 2026
$9.4M
Functional Genomics of Neuroplasticity in SchizophreniaR01MH095088 · NIMH · BROAD INSTITUTE, INC. · PI HAGGARTY, STEPHEN J · 2011 to 2014
$2.5M
NICHD NIH HHS P50 HD105351NIMH NIH HHS R01 MH095088
6 · The paper itself

Abstract

Activity-regulated cytoskeleton-associated protein (Arc) is an immediate early gene product that support neuroplastic changes important for cognitive function and memory formation. As a protein with homology to the retroviral Gag protein, a particular characteristic of Arc is its capacity to self-assemble into virus-like capsids that can package mRNAs and transfer those transcripts to other cells. Although a lot has been uncovered about the contributions of Arc to neuron biology and behavior, very little is known about how different functions of Arc are coordinately regulated both temporally and spatially in neurons. The answer to this question we hypothesized must involve the occurrence of different protein post-translational modifications acting to confer specificity. In this study, we used mass spectrometry and sequence prediction strategies to map novel Arc phosphorylation sites. Our approach led us to recognize serine 67 (S67) and threonine 278 (T278) as residues that can be modified by TNIK, which is a kinase abundantly expressed in neurons that shares many functional overlaps with Arc and has, along with its interacting proteins such as the NMDA receptor, and been implicated as a risk factor for psychiatric disorders. Furthermore, characterization of each residue using site-directed mutagenesis to create S67 and T278 mutant variants revealed that TNIK action at those amino acids can strongly influence Arc's subcellular distribution and self-assembly as capsids. Together, our findings reveal an unsuspected connection between Arc and TNIK. Better understanding of the interplay between these two proteins in neuronal cells could lead to new insights about apparition and progression of psychiatric disorders. Cover Image for this issue: https://doi.org/10.1111/jnc.15077.

Indexed as

Amino Acid SequenceAnimalsCell Line, TumorCytoskeletal ProteinsMiceNerve Tissue ProteinsNeuronsPhosphorylationProtein Serine-Threonine Kinasesactivity regulated cytoskeletal-associated proteinCytoskeletal ProteinsNerve Tissue ProteinsProtein Serine-Threonine KinasesTNIK protein, mouseArcelectron microscopygag proteinoligomerizationphosphorylationTNIKvirus-like capsids

Identifiers

PMID34077555
PMCPMC8390433
OpenAlexW3165553411

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.