Evidence map›Paper›PMID 34076476›Full record

ArticleJournal of clinical microbiology2021

Validation of a Gradient Diffusion Method (Etest) for Testing of Antimicrobial Susceptibility of Aerococcus urinae to Fluoroquinolones.

France Emilie Roy, Tammy Berteau, Julie Bestman-Smith, Simon Grandjean Lapierre, Simon Frédéric Dufresne, Marc-Christian Domingo, Jean-Michel Leduc

Open access · greenAbstract read
In one paragraph

Article in Journal of clinical microbiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 6 institutions in 1 country.

France Emilie RoyDepartment of Microbiology, Infectious Diseases and Immunology, Faculty of Medicine, Université Laval, Quebec, Canada.
Tammy BerteauDepartment of Microbiology, Infectious Diseases and Immunology, Faculty of Medicine, Université Laval, Quebec, Canada.
Julie Bestman-SmithDepartment of Microbiology, Infectious Diseases and Immunology, Faculty of Medicine, Université Laval, Quebec, Canada.
Simon Grandjean LapierreDepartment of Microbiology, Infectious Diseases and Immunology, Faculty of Medicine, Université de Montréal, Montreal, Canada.
Simon Frédéric DufresneDepartment of Microbiology, Infectious Diseases and Immunology, Faculty of Medicine, Université de Montréal, Montreal, Canada.
Marc-Christian DomingoLaboratoire de Santé Publique du Québec, Institut National de Santé Publique du Québec, Ste-Anne-de-Bellevue, Canada.
Jean-Michel LeducDepartment of Microbiology, Infectious Diseases and Immunology, Faculty of Medicine, Université de Montréal, Montreal, Canada.
Université Laval · CACentre Hospitalier de l’Université de Montréal · CACentre hospitalier universitaire de Québec · CAHôpital du Sacré-Cœur de Montréal · CAHôpital Maisonneuve-Rosemont · CAInstitut National de Santé Publique du Québec · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Aerococcus urinae is a urinary pathogen with well-described resistance to fluoroquinolones. This study aimed to validate the gradient diffusion (GD) method (Etest) on cation-adjusted Mueller-Hinton agar with 5% sheep blood for testing the susceptibilities of Aerococcus urinae to the antimicrobial agents ciprofloxacin and levofloxacin and to compare the Etest to the broth microdilution (BMD) method from CLSI document M45-A3. Agar dilution (AD), as recommended by EUCAST, was used as an alternative reference method to arbitrate discrepancies or address technical issues. Aerococcus urinae isolates from urinary specimens were prospectively collected between June 2016 and December 2017 from six hospitals in Quebec, Canada, and identifications were confirmed using Vitek MS with the IVD 3.0 database. Of the 207 isolates tested using BMD, 37 (17.9%) showed trailing and 19 (9.2%) showed insufficient growth; these were tested using AD. Also, 38 isolates (18.4%) for ciprofloxacin and 13 isolates (6.3%) for levofloxacin showed a lack of essential or categorical agreement between the Etest and BMD and were also tested by AD. By use of a combined reference method (BMD or AD), the susceptibility rates of Aerococcus urinae were 82.6% and 81.6% for ciprofloxacin and levofloxacin, respectively. Categorical agreement between GD and the combined reference methods was 95.2% for ciprofloxacin and 97.1% for levofloxacin, with no very major error identified. Major and minor error rates were 0.6% and 4.3% for ciprofloxacin and 1.2% and 1.9% for levofloxacin. Overall, antimicrobial susceptibility testing (AST) using the Etest on sheep blood agar showed good agreement with the reference methods and can be considered by clinical laboratories wishing to perform AST on Aerococcus urinae isolates.

Indexed as

Anti-Bacterial AgentsFluoroquinolonesAerococcusAnimalsCanadaDisk Diffusion Antimicrobial TestsMicrobial Sensitivity TestsQuebecSheepAnti-Bacterial AgentsFluoroquinolonesAerococcus urinaeagar dilutionantimicrobial susceptibility testingbroth microdilutionciprofloxacinfluoroquinolonesgradient diffusionlevofloxacinurinary tract infections

Identifiers

PMID34076476
PMCPMC8373239
OpenAlexW3164229396

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.