Evidence map›Paper›PMID 34073846›Full record

ArticleViruses2021

Phylogenetic Networks and Parameters Inferred from HIV Nucleotide Sequences of High-Risk and General Population Groups in Uganda: Implications for Epidemic Control.

Nicholas Bbosa, Deogratius Ssemwanga, Rebecca N Nsubuga, Noah Kiwanuka, Bernard S Bagaya, John M Kitayimbwa, Alfred Ssekagiri, Gonzalo Yebra, Pontiano Kaleebu, Andrew Leigh-Brown

Open access · goldAbstract read
In one paragraph

Article in Viruses, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.7field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

Nicholas BbosaMedical Research Council (MRC)/Uganda Virus Research Institute (UVRI) and London School of Hygiene and Tropical Medicine (LSHTM) Uganda Research Unit, Entebbe 256, Uganda.
Deogratius SsemwangaMedical Research Council (MRC)/Uganda Virus Research Institute (UVRI) and London School of Hygiene and Tropical Medicine (LSHTM) Uganda Research Unit, Entebbe 256, Uganda.ORCID 0000-0001-9675-4234
Rebecca N NsubugaMedical Research Council (MRC)/Uganda Virus Research Institute (UVRI) and London School of Hygiene and Tropical Medicine (LSHTM) Uganda Research Unit, Entebbe 256, Uganda.
Noah KiwanukaSchool of Public Health, College of Health Sciences, Makerere University, Kampala 256, Uganda.
Bernard S BagayaIAVI-UVRI HIV Vaccine Program, Entebbe 256, Uganda.
John M KitayimbwaCentre for Computational Biology, Uganda Christian University, Mukono 256, Uganda.
Alfred SsekagiriDepartment of General Virology, Uganda Virus Research Institute, Entebbe 256, Uganda.ORCID 0000-0002-6549-3550
Gonzalo YebraThe Roslin Institute, Royal (Dick) School of Veterinary Medicine, Easter Bush Campus, University of Edinburgh, Edinburgh EH25 9RG, UK.ORCID 0000-0002-3472-3667
Pontiano KaleebuMedical Research Council (MRC)/Uganda Virus Research Institute (UVRI) and London School of Hygiene and Tropical Medicine (LSHTM) Uganda Research Unit, Entebbe 256, Uganda.
Andrew Leigh-BrownInstitute of Evolutionary Biology, University of Edinburgh, Edinburgh EH9 3FL, UK.ORCID 0000-0002-5700-3128
Uganda Virus Research Institute · UGMakerere University · UGRoslin Institute · GBUganda Christian University · UGUniversity of Edinburgh · GB

Funding

Medical Research Council MC_EX_MR/L016273/1Medical Research Council MC_UU_00027/1
6 · The paper itself

Abstract

Phylogenetic inference is useful in characterising HIV transmission networks and assessing where prevention is likely to have the greatest impact. However, estimating parameters that influence the network structure is still scarce, but important in evaluating determinants of HIV spread. We analyzed 2017 HIV

Indexed as

PhylogenyAdultBase SequenceBayes TheoremCross-Sectional StudiesEpidemicsFemaleHIV-1HIV InfectionsHumansMalePopulation GroupsRisk FactorsSex WorkersUgandaepidemic controlHIVmodelparametersphylodynamicphylogeneticpopulationspreventiontransmission network

Identifiers

PMID34073846
PMCPMC8225143
OpenAlexW3164859849

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.