Evidence map›Paper›PMID 34071075›Full record

ArticleCells2021

Recurrent HBV Integration Targets as Potential Drivers in Hepatocellular Carcinoma.

Selena Y Lin, Adam Zhang, Jessica Lian, Jeremy Wang, Ting-Tsung Chang, Yih-Jyh Lin, Wei Song, Ying-Hsiu Su

Open access · goldAbstract read
In one paragraph

Article in Cells, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 23 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Selena Y LinJBS Science, Inc., Doylestown, PA 18902, USA.
Adam ZhangThe Baruch S. Blumberg Research Institute, Doylestown, PA 18902, USA.
Jessica LianThe Baruch S. Blumberg Research Institute, Doylestown, PA 18902, USA.
Jeremy WangJBS Science, Inc., Doylestown, PA 18902, USA.
Ting-Tsung ChangDepartment of Internal Medicine, National Cheng Kung University Medical College, Tainan 704, Taiwan.ORCID 0000-0002-5073-2678
Yih-Jyh LinDepartment of Surgery, National Cheng Kung University Medical College, Tainan 704, Taiwan.
Wei SongJBS Science, Inc., Doylestown, PA 18902, USA.
Ying-Hsiu SuThe Baruch S. Blumberg Research Institute, Doylestown, PA 18902, USA.
Baruch S. Blumberg Institute · USJBS Science (United States) · USNational Cheng Kung University · TW

Funding

Development of a Urine Test for the Early Detection of Liver CancerR44CA165312 · NCI · JBS SCIENCE, INC. · PI LIN, SELENA · 2013 to 2020
$4.9M
Detection of major HBV integration sites in urine as a biomarker for HBV-associated liver cancerR43CA192507 · NCI · U-SCREEN DX, INC. · PI SONG, WEI · 2015 to 2015
$252k
Development of a Urine Test for the Early Detection of Liver CancerR43CA165312 · NCI · JBS SCIENCE, INC. · PI SONG, WEI · 2012 to 2012
$247k
NIH HHS R43 CA165312NIH HHS R43 CA192507NIH HHS R44 CA165312
6 · The paper itself

Abstract

Chronic hepatitis B virus (HBV) infection is the major etiology of hepatocellular carcinoma (HCC), frequently with HBV integrating into the host genome. HBV integration, found in 85% of HBV-associated HCC (HBV-HCC) tissue samples, has been suggested to be oncogenic. Here, we investigated the potential of HBV-HCC driver identification via the characterization of recurrently targeted genes (RTGs). A total of 18,596 HBV integration sites from our in-house study and others were analyzed. RTGs were identified by applying three criteria: at least two HCC subjects, reported by at least two studies, and the number of reporting studies. A total of 396 RTGs were identified. Among the 28 most frequent RTGs, defined as affected in at least 10 HCC patients, 23 (82%) were associated with carcinogenesis and 5 (18%) had no known function. Available breakpoint positions from the three most frequent RTGs,

Indexed as

AgedCarcinogenesisCarcinoma, HepatocellularDisease ManagementFemaleHepatitis B, ChronicHepatitis B virusHumansLiver NeoplasmsMaleMiddle AgedOncogenesHBV integrationHCC driver identificationhepatitis B virushepatocellular carcinoma

Identifiers

PMID34071075
PMCPMC8224658
OpenAlexW3165310526

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.