Evidence map›Paper›PMID 34069916›Full record

ArticleInternational journal of molecular sciences2021

Taxonomic and Gene Category Analyses of Subgingival Plaques from a Group of Japanese Individuals with and without Periodontitis.

Kazuki Izawa, Kazuko Okamoto-Shibayama, Daichi Kita, Sachiyo Tomita, Atsushi Saito, Takashi Ishida, Masahito Ohue, Yutaka Akiyama, Kazuyuki Ishihara

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Kazuki IzawaDepartment of Computer Science, School of Computing, Tokyo Institute of Technology, Meguro-ku, Tokyo 152-8550, Japan.
Kazuko Okamoto-ShibayamaDepartment of Microbiology, Tokyo Dental College, Chiyoda-ku, Tokyo 101-0061, Japan.
Daichi KitaDepartment of Periodontology, Tokyo Dental College, Chiyoda-ku, Tokyo 101-0061, Japan.
Sachiyo TomitaDepartment of Periodontology, Tokyo Dental College, Chiyoda-ku, Tokyo 101-0061, Japan.
Atsushi SaitoDepartment of Periodontology, Tokyo Dental College, Chiyoda-ku, Tokyo 101-0061, Japan.ORCID 0000-0002-0065-2207
Takashi IshidaDepartment of Computer Science, School of Computing, Tokyo Institute of Technology, Meguro-ku, Tokyo 152-8550, Japan.ORCID 0000-0002-9478-3223
Masahito OhueDepartment of Computer Science, School of Computing, Tokyo Institute of Technology, Meguro-ku, Tokyo 152-8550, Japan.ORCID 0000-0002-0120-1643
Yutaka AkiyamaDepartment of Computer Science, School of Computing, Tokyo Institute of Technology, Meguro-ku, Tokyo 152-8550, Japan.ORCID 0000-0003-2863-8703
Kazuyuki IshiharaDepartment of Microbiology, Tokyo Dental College, Chiyoda-ku, Tokyo 101-0061, Japan.ORCID 0000-0002-6567-807X
Tokyo Dental College · JPTokyo Institute of Technology · JP

Funding

Japan Society for Promotion of Science 18K09559MEXT Private University Research Branding Project 45
6 · The paper itself

Abstract

Periodontitis is an inflammation of tooth-supporting tissues, which is caused by bacteria in the subgingival plaque (biofilm) and the host immune response. Traditionally, subgingival pathogens have been investigated using methods such as culturing, DNA probes, or PCR. The development of next-generation sequencing made it possible to investigate the whole microbiome in the subgingival plaque. Previous studies have implicated dysbiosis of the subgingival microbiome in the etiology of periodontitis. However, details are still lacking. In this study, we conducted a metagenomic analysis of subgingival plaque samples from a group of Japanese individuals with and without periodontitis. In the taxonomic composition analysis, genus

Indexed as

AdultAgedBacteriaDental PlaqueDysbiosisFemaleGingivaHigh-Throughput Nucleotide SequencingHumansJapanMaleMetagenomeMicrobiotaMiddle AgedPeriodontal PocketPeriodontitisRNA, Ribosomal, 16Shuman oral microbiomemetagenomicsperiodontal diseaseperiodontal pathogensperiodontitissubgingival plaque biofilm

Identifiers

PMID34069916
PMCPMC8157553
OpenAlexW3160390856

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.