Evidence map›Paper›PMID 34065980›Full record

ArticleViruses2021

PERK Is Critical for Alphavirus Nonstructural Protein Translation.

Bibha Dahal, Caitlin W Lehman, Ivan Akhrymuk, Nicole R Bracci, Lauren Panny, Michael D Barrera, Nishank Bhalla, Jonathan L Jacobs, Jonathan D Dinman, Kylene Kehn-Hall

RetractedOpen access · goldAbstract readRetracted Publication
In one paragraph

Article in Viruses, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It has been retracted, and should not be counted. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.8field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 9 citations in OpenAlex.

  1. Review
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  6. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Bibha DahalNational Center for Biodefense and Infectious Diseases, School of Systems Biology, George Mason University, Manassas, VA 20110, USA.
Caitlin W LehmanNational Center for Biodefense and Infectious Diseases, School of Systems Biology, George Mason University, Manassas, VA 20110, USA.ORCID 0000-0002-8012-5377
Ivan AkhrymukNational Center for Biodefense and Infectious Diseases, School of Systems Biology, George Mason University, Manassas, VA 20110, USA.
Nicole R BracciNational Center for Biodefense and Infectious Diseases, School of Systems Biology, George Mason University, Manassas, VA 20110, USA.ORCID 0000-0002-7298-4796
Lauren PannyNational Center for Biodefense and Infectious Diseases, School of Systems Biology, George Mason University, Manassas, VA 20110, USA.
Michael D BarreraNational Center for Biodefense and Infectious Diseases, School of Systems Biology, George Mason University, Manassas, VA 20110, USA.
Nishank BhallaNational Center for Biodefense and Infectious Diseases, School of Systems Biology, George Mason University, Manassas, VA 20110, USA.
Jonathan L JacobsAmerican Type Culture Collection, Manassas, VA 20110, USA.ORCID 0000-0001-5608-4256
Jonathan D DinmanDepartment of Cell Biology and Molecular Genetics, University of Maryland, College Park, MD 20742, USA.ORCID 0000-0002-2402-9698
Kylene Kehn-HallNational Center for Biodefense and Infectious Diseases, School of Systems Biology, George Mason University, Manassas, VA 20110, USA.ORCID 0000-0001-8036-7213
George Mason University · USAmerican Type Culture Collection · USUniversity of Maryland, College Park · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Venezuelan equine encephalitis virus (VEEV) is an alphavirus that causes encephalitis. Previous work indicated that VEEV infection induced early growth response 1 (EGR1) expression, leading to cell death via the protein kinase R (PKR)-like endoplasmic reticulum kinase (PERK) arm of the unfolded protein response (UPR) pathway. Loss of PERK prevented EGR1 induction and decreased VEEV-induced death. The results presented within show that loss of PERK in human primary astrocytes dramatically reduced VEEV and eastern equine encephalitis virus (EEEV) infectious titers by 4-5 log

Indexed as

Protein BiosynthesisAlphavirusAstrocytesCell DeathCells, CulturedeIF-2 KinaseEncephalitis Virus, Venezuelan EquineEndothelial CellsHEK293 CellsHumansPericytesRNA, ViralUnfolded Protein ResponseViral Nonstructural ProteinsEIF2AK3 protein, humaneIF-2 KinaseRNA, ViralViral Nonstructural Proteinsalphaviruseastern equine encephalitis virus (EEEV)PERKtranslationVenezuelan equine encephalitis virus (VEEV)

Identifiers

PMID34065980
PMCPMC8151226
OpenAlexW3160414865

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.