Evidence map›Paper›PMID 34064652›Full record

ArticleMolecules (Basel, Switzerland)2021

The RNA-Binding Protein HuD Regulates Alternative Splicing and Alternative Polyadenylation in the Mouse Neocortex.

Rebecca M Sena, Jeffery L Twiss, Amy S Gardiner, Michela Dell'Orco, David N Linsenbardt, Nora I Perrone-Bizzozero

Open access · goldAbstract read
In one paragraph

Article in Molecules (Basel, Switzerland), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 14 citations in OpenAlex.

  1. Review
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  8. The molecular genetics of nELAVL in brain development and disease.European journal of human genetics : EJHG · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Rebecca M SenaDepartment Neurosciences, University of New Mexico School of Medicine, Albuquerque, NM 87131, USA.
Jeffery L TwissDepartment Biological Sciences, University of South Carolina, Columbia, SC 29208, USA.
Amy S GardinerDepartment Neurosciences, University of New Mexico School of Medicine, Albuquerque, NM 87131, USA.ORCID 0000-0002-8179-4919
Michela Dell'OrcoDepartment Neurosciences, University of New Mexico School of Medicine, Albuquerque, NM 87131, USA.ORCID 0000-0002-0742-7037
David N LinsenbardtDepartment Neurosciences, University of New Mexico School of Medicine, Albuquerque, NM 87131, USA.
Nora I Perrone-BizzozeroDepartment Neurosciences, University of New Mexico School of Medicine, Albuquerque, NM 87131, USA.
University of New Mexico · USUniversity of South Carolina · US

Funding

University of New Mexico (UNM) Center for Brain Recovery and RepairP20GM109089 · NIGMS · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI SHUTTLEWORTH, CLAUDE W · 2015 to 2024
$22.7M
Understanding neurophysiological deficits in response inhibition in children with FASDP50AA022534 · NIAAA · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI Carlos Fernando Valenzuela · 2014 to 2026
$21.5M
Destabilization of axonal mRNAs by KHSRP complexes during axon regenerationR01NS089633 · NINDS · UNIVERSITY OF SOUTH CAROLINA AT COLUMBIA · PI TWISS, JEFFERY L · 2015 to 2025
$4.1M
Repeated Binge Drinking and the Genetic Regulation of Corticostriatal SynchronyR00AA025120 · NIAAA · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI LINSENBARDT, DAVID NATHANIEL · 2020 to 2022
$993k
Repeated Binge Drinking and the Genetic Regulation of Corticostriatal SynchronyK99AA025120 · NIAAA · INDIANA UNIVERSITY INDIANAPOLIS · PI LINSENBARDT, DAVID NATHANIEL · 2017 to 2018
$316k
Electrophysiological ensembles organization during alcohol cue-induced intake andF32AA022268 · NIAAA · INDIANA UNIVERSITY INDIANAPOLIS · PI LINSENBARDT, DAVID NATHANIEL · 2013 to 2015
$155k
NIAAA NIH HHS F32 AA022268NIAAA NIH HHS K99 AA025120NIAAA NIH HHS P50 AA022534NIAAA NIH HHS R00 AA025120NIGMS NIH HHS P20 GM109089NIH HHS R01NS089633NINDS NIH HHS R01 NS089633
6 · The paper itself

Abstract

The neuronal Hu/ELAV-like proteins HuB, HuC and HuD are a class of RNA-binding proteins that are crucial for proper development and maintenance of the nervous system. These proteins bind to AU-rich elements (AREs) in the untranslated regions (3'-UTRs) of target mRNAs regulating mRNA stability, transport and translation. In addition to these cytoplasmic functions, Hu proteins have been implicated in alternative splicing and alternative polyadenylation in the nucleus. The purpose of this study was to identify transcriptome-wide effects of HuD deletion on both of these nuclear events using RNA sequencing data obtained from the neocortex of

Indexed as

Alternative SplicingAnimalsELAV-Like Protein 4ExonsMiceMice, Inbred C57BLMice, KnockoutNeocortexPolyadenylationRNA, MessengerElavl4 protein, mouseELAV-Like Protein 4RNA, Messengeralternative polyadenylationalternative splicingElavl4 KOHuDneocortex

Identifiers

PMID34064652
PMCPMC8151252
OpenAlexW3160925199

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.