Evidence map›Paper›PMID 34063931›Full record

ArticleCells2021

Nucleoporin TPR Affects C2C12 Myogenic Differentiation via Regulation of

Jana Uhlířová, Lenka Šebestová, Karel Fišer, Tomáš Sieger, Jindřiška Fišerová, Pavel Hozák

Open access · goldAbstract read
In one paragraph

Article in Cells, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.3field-weighted citation impact, top 44% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Review
  3. Advances in the understanding of nuclear pore complexes in human diseases.Journal of cancer research and clinical oncology · 2024
    Review
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Jana UhlířováDepartment of Biology of the Cell Nucleus, Institute of Molecular Genetics of the CAS, 142 20 Prague, Czech Republic.ORCID 0000-0002-3419-8807
Lenka ŠebestováDepartment of Biology of the Cell Nucleus, Institute of Molecular Genetics of the CAS, 142 20 Prague, Czech Republic.
Karel FišerCLIP-Childhood Leukaemia Investigation Prague, Department of Pediatric Hematology/Oncology, Second Faculty of Medicine of the Charles University and University Hospital Motol, 150 00 Prague, Czech Republic.ORCID 0000-0002-7265-3268
Tomáš SiegerDepartment of Cybernetics, Faculty of Electrical Engineering, Czech Technical University in Prague, 121 35 Prague, Czech Republic.ORCID 0000-0003-4960-1934
Jindřiška FišerováDepartment of Biology of the Cell Nucleus, Institute of Molecular Genetics of the CAS, 142 20 Prague, Czech Republic.
Pavel HozákDepartment of Biology of the Cell Nucleus, Institute of Molecular Genetics of the CAS, 142 20 Prague, Czech Republic.
Charles University · CZCzech Academy of Sciences, Institute of Molecular Genetics · CZCzech Technical University in Prague · CZ

Funding

European Cooperation in Science and Technology LTC19048European Cooperation in Science and Technology LTC20024European Regional Development Fund CZ.02.1.01/0.0/0.0/16_01/0001775European Regional Development Fund CZ.1.05/1.1.00/02.0109Grantová Agentura České Republiky 15-08835YGrantová Agentura České Republiky 18-19714SGrantová Agentura České Republiky 19-05608SGrantová Agentura, Univerzita Karlova No.1370119Grantová Agentura, Univerzita Karlova No.930218Ministerstvo Školství, Mládeže a Tělovýchovy LM2018129 Czech-BioImagingÚstav molekulární genetiky AV ČR, v. v. i. 68378050
6 · The paper itself

Abstract

The nuclear pore complex (NPC) has emerged as a hub for the transcriptional regulation of a subset of genes, and this type of regulation plays an important role during differentiation. Nucleoporin TPR forms the nuclear basket of the NPC and is crucial for the enrichment of open chromatin around NPCs. TPR has been implicated in the regulation of transcription; however, the role of TPR in gene expression and cell differentiation has not been described. Here we show that depletion of TPR results in an aberrant morphology of murine proliferating C2C12 myoblasts (MBs) and differentiated C2C12 myotubes (MTs). The ChIP-Seq data revealed that TPR binds to genes linked to muscle formation and function, such as myosin heavy chain (

Indexed as

Muscle Fibers, SkeletalMyoblasts, SkeletalAnimalsCell DifferentiationCell LineGene ExpressionGene Expression RegulationMiceMuscle DevelopmentMyosin Heavy ChainsNuclear Pore Complex ProteinsProto-Oncogene ProteinsMYH4 protein, mouseMyosin Heavy ChainsNuclear Pore Complex ProteinsProto-Oncogene ProteinsTPR protein, mousegene expressionLSD1Myh4myogenic differentiationnucleoporinOlfrTPRtranslocated promoter region

Identifiers

PMID34063931
PMCPMC8224082
OpenAlexW3163323701

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.