Evidence map›Paper›PMID 34061850›Full record

ArticlePLoS genetics2021

An autoregulatory negative feedback loop controls thermomorphogenesis in Arabidopsis.

Sanghwa Lee, Ling Zhu, Enamul Huq

Abstract read
In one paragraph

Article in PLoS genetics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Review
  2. Article
  3. CUL3Science advances · 2026
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Assessing Temperature Responses in Roots.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  11. Genome-Wide Characterization ofPlants (Basel, Switzerland) · 2023
    Article
  12. Article
  13. Review
  14. Article
  15. Review
  16. PIF7 controls leaf cell proliferation through an AN3 substitution repression mechanism.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  17. Review
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Sanghwa LeeDepartment of Molecular Biosciences and The Institute for Cellular and Molecular Biology, The University of Texas at Austin, Austin, Texas, United States of America.ORCID 0000-0002-6032-2525
Ling ZhuDepartment of Molecular Biosciences and The Institute for Cellular and Molecular Biology, The University of Texas at Austin, Austin, Texas, United States of America.ORCID 0000-0003-1303-0930
Enamul HuqDepartment of Molecular Biosciences and The Institute for Cellular and Molecular Biology, The University of Texas at Austin, Austin, Texas, United States of America.ORCID 0000-0001-7692-5139

Funding

Phytochrome-mediated light signaling in plantsR01GM114297 · NIGMS · UNIVERSITY OF TEXAS AT AUSTIN · PI HUQ, ENAMUL · 2015 to 2018
$1.2M
NIGMS NIH HHS R01 GM114297
6 · The paper itself

Abstract

Plant growth and development are acutely sensitive to high ambient temperature caused in part due to climate change. However, the mechanism of high ambient temperature signaling is not well defined. Here, we show that HECATEs (HEC1 and HEC2), two helix-loop-helix transcription factors, inhibit thermomorphogenesis. While the expression of HEC1 and HEC2 is increased and HEC2 protein is stabilized at high ambient temperature, hec1hec2 double mutant showed exaggerated thermomorphogenesis. Analyses of the four PHYTOCHROME INTERACTING FACTOR (PIF1, PIF3, PIF4 and PIF5) mutants and overexpression lines showed that they all contribute to promote thermomorphogenesis. Furthermore, genetic analysis showed that pifQ is epistatic to hec1hec2. HECs and PIFs oppositely control the expression of many genes in response to high ambient temperature. PIFs activate the expression of HECs in response to high ambient temperature. HEC2 in turn interacts with PIF4 both in yeast and in vivo. In the absence of HECs, PIF4 binding to its own promoter as well as the target gene promoters was enhanced, indicating that HECs control PIF4 activity via heterodimerization. Overall, these data suggest that PIF4-HEC forms an autoregulatory composite negative feedback loop that controls growth genes to modulate thermomorphogenesis.

Indexed as

ArabidopsisArabidopsis ProteinsFeedbackGenes, PlantMorphogenesisPromoter Regions, GeneticTemperatureArabidopsis Proteins

Identifiers

PMID34061850
PMCPMC8195427

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.