Evidence map›Paper›PMID 34056410›Full record

ArticleACS omega2021

Theoretical Study on the Mechanism of the Acylate Reaction of β-Lactamase.

Wen-Mei Wei, Yan-Li Xu, Ren-Hui Zheng, Tingting Zhao, Weijun Fang, Yi-De Qin

Open access · goldAbstract read
In one paragraph

Article in ACS omega, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 59% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 3 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Wen-Mei WeiSchool of Basic Medical Sciences, Anhui Medical University, Hefei, Anhui 230032, P. R. China.
Yan-Li XuSchool of Basic Medical Sciences, Anhui Medical University, Hefei, Anhui 230032, P. R. China.
Ren-Hui ZhengBeijing National Laboratory for Molecular Sciences, State Key Laboratory for Structural Chemistry of Unstable and Stable Species, Institute of Chemistry, Chinese Academy of Sciences, Zhongguancun, Beijing 100190, P. R. China.ORCID 0000-0002-0236-9675
Tingting ZhaoSchool of Basic Medical Sciences, Anhui Medical University, Hefei, Anhui 230032, P. R. China.ORCID 0000-0001-9376-6715
Weijun FangSchool of Basic Medical Sciences, Anhui Medical University, Hefei, Anhui 230032, P. R. China.ORCID 0000-0002-4848-0600
Yi-De QinSchool of Basic Medical Sciences, Anhui Medical University, Hefei, Anhui 230032, P. R. China.
Anhui Medical University · CNChinese Academy of Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Using density functional theory and a cluster approach, we study the reaction potential surface and compute Gibbs free energies for the acylate reaction of β-lactamase with penicillin G, where the solvent effect is important and taken into consideration. Two reaction paths are investigated: one is a multi-step process with a rate-limit energy barrier of 19.1 kcal/mol, which is relatively small, and the reaction can easily occur; the other is a one-step process with a barrier of 45.0 kcal/mol, which is large and thus makes the reaction hard to occur. The reason why the two paths have different barriers is explained.

Identifiers

PMID34056410
PMCPMC8154126
OpenAlexW3159231916

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.