Evidence map›Paper›PMID 34054300›Full record

ArticleInfection and drug resistance2021

Shift in the Dominant Sequence Type of Carbapenem-Resistant

Jingjing Chen, Chang Hu, Ruixuan Wang, Fushun Li, Guoquan Sun, Min Yang, Yunzhuo Chu

Open access · goldAbstract read
In one paragraph

Article in Infection and drug resistance, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed, 1 pooled it
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 1 synthesis or guideline pooled it, 30 citations in OpenAlex.

  1. Association of Klebsiella pneumoniae sequence type 11 but not other virulence factors with patient mortality: a systematic review and meta-analysis.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2026
    Pooled it
  2. Article
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  6. Multicenter Surveillance ofInfection and drug resistance · 2026
    Article
  7. Article
  8. Co-evolution of resistance and virulence inFrontiers in cellular and infection microbiology · 2026
    Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
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  15. Molecular epidemiology of carbapenem-resistantFrontiers in microbiology · 2025
    Article
  16. Molecular Prevalence and Geographical Variations of Carbapenem-Resistant Klebsiella pneumoniae ST15 Isolates in a Tertiary Hospital in Ningbo, China.Medical science monitor : international medical journal of experimental and clinical research · 2024
    Article
  17. Virulence gene distribution and molecular epidemiological characteristics of carbapenem-resistantZhong nan da xue xue bao. Yi xue ban = Journal of Central South University. Medical sciences · 2024
    Article
  18. Review
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  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Jingjing ChenDepartment of Laboratory Medicine, The First Affiliated Hospital of China Medical University, Shenyang, People's Republic of China.
Chang HuDepartment of Laboratory Medicine, The First Affiliated Hospital of China Medical University, Shenyang, People's Republic of China.
Ruixuan WangDepartment of Laboratory Medicine, The First Affiliated Hospital of China Medical University, Shenyang, People's Republic of China.
Fushun LiDepartment of Laboratory Medicine, The First Affiliated Hospital of China Medical University, Shenyang, People's Republic of China.
Guoquan SunDepartment of Laboratory Medicine, The First Affiliated Hospital of China Medical University, Shenyang, People's Republic of China.
Min YangDepartment of Laboratory Medicine, The First Affiliated Hospital of China Medical University, Shenyang, People's Republic of China.
Yunzhuo ChuDepartment of Laboratory Medicine, The First Affiliated Hospital of China Medical University, Shenyang, People's Republic of China.
China Medical University · CNChinese Academy of Medical Sciences & Peking Union Medical College · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveTo investigate the clinical characteristics and molecular epidemiology of carbapenem-resistant

methodsFifty-one patients were diagnosed with CRKP bloodstream infection between January 2015 and December 2020, among which 42 isolates were available for further study. Species identification and antibiotic susceptibilities were tested with matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS) and VITEK 2 systems. Carbapenemase genes, virulence genes and MLST genes were detected by polymerase chain reaction. Moreover, the string test and serum killing assay were performed to evaluate the virulence of the CRKP isolates.

resultsDuring the six-year period, the detection rate of CRKP in bloodstream infection showed an increasing trend, with the intensive care unit, hematology and respiratory medicine wards mainly affected. Molecular epidemiology analyses showed that KPC-2 was the dominant carbapenemase gene. In addition, the dominant sequence type (ST) of CRKP shifted from ST11 to ST15 strains, which were all sensitive to amikacin in contrast to the ST11 stains. Furthermore, ST15 CRKP strains were positive for the KfuB virulence gene and more resistant to serum killing compared to the ST11 CRKP strains. Nonetheless, the mortality rate of patients infected with ST11 and ST15 CRKP did not show any significant differences.

conclusionA shift in the dominant sequence type of CRKP bloodstream infections from ST11 to ST15 was observed during the years 2015-2020. Compared to ST11, the ST15 CRKP strains showed amikacin sensitivity, positivity for KfuB gene, and serum resistance, which may indicate stronger virulence.

Indexed as

carbapenem-resistant Klebsiella pneumoniaedrug resistanceKPC-2sequence typevirulence

Identifiers

PMID34054300
PMCPMC8158045
OpenAlexW3162513260

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.