Evidence map›Paper›PMID 34051147›Full record

ArticleImmunity2021

Distinct immunological signatures discriminate severe COVID-19 from non-SARS-CoV-2-driven critical pneumonia.

Stefanie Kreutmair, Susanne Unger, Nicolás Gonzalo Núñez, Florian Ingelfinger, Chiara Alberti, Donatella De Feo, Sinduya Krishnarajah, Manuel Kauffmann, Ekaterina Friebel, Sepideh Babaei and 16 more

Erratum issued Registry-linked trialOpen access · bronzeAbstract readComparative Study
In one paragraph

Article in Immunity, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. It is linked to trial NCT04668170 (Identification of Predictive Immune Biomarkers Based on the Understanding of COVID-19 Pathogenesis to Influence Therapeutic Management), which is not on this map. Cited by 70 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
70citing papers in PubMed, 1 pooled it
5.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT04668170 completednot on this map

Identification of Predictive Immune Biomarkers Based on the Understanding of COVID-19 Pathogenesis to Influence Therapeutic Management

TypeobservationalSponsorUniversity Hospital, ToulouseRan2020 to 2023Enrolled304ConditionsCOVID-19ArmsBlood collection on admission and longitudinally, Blood collection on their first consultation and 10 to 14 days later
3 · Its place in the literature

Who cites it

70 citing papers in PubMed, 1 synthesis or guideline pooled it, 101 citations in OpenAlex.

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10 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

26 authors at 6 institutions in 3 countries.

Stefanie KreutmairInstitute of Experimental Immunology, University of Zurich, 8057 Zurich, Switzerland; German Cancer Consortium (DKTK) and German Cancer Research Center (DKFZ), Heidelberg, Partner Site Freiburg, 79106 Freiburg, Germany.
Susanne UngerInstitute of Experimental Immunology, University of Zurich, 8057 Zurich, Switzerland.
Nicolás Gonzalo NúñezInstitute of Experimental Immunology, University of Zurich, 8057 Zurich, Switzerland.
Florian IngelfingerInstitute of Experimental Immunology, University of Zurich, 8057 Zurich, Switzerland.
Chiara AlbertiInstitute of Experimental Immunology, University of Zurich, 8057 Zurich, Switzerland.
Donatella De FeoInstitute of Experimental Immunology, University of Zurich, 8057 Zurich, Switzerland.
Sinduya KrishnarajahInstitute of Experimental Immunology, University of Zurich, 8057 Zurich, Switzerland.
Manuel KauffmannInstitute of Experimental Immunology, University of Zurich, 8057 Zurich, Switzerland.
Ekaterina FriebelInstitute of Experimental Immunology, University of Zurich, 8057 Zurich, Switzerland.
Sepideh BabaeiDepartment Internal Medicine I, Eberhard-Karls University, 72076 Tuebingen, Germany.
Benjamin GaboritUniversité de Nantes, CHU Nantes, Pôle Anesthésie Réanimations, Service d'Anesthésie Réanimation Chirurgicale, Hôtel Dieu, 44093 Nantes, France.
Mirjam LutzInstitute of Experimental Immunology, University of Zurich, 8057 Zurich, Switzerland.
Nicole Puertas JuradoInstitute of Experimental Immunology, University of Zurich, 8057 Zurich, Switzerland.
Nisar P MalekDepartment Internal Medicine I, Eberhard-Karls University, 72076 Tuebingen, Germany.
Siri GoepelDepartment Internal Medicine I, Eberhard-Karls University, 72076 Tuebingen, Germany; German Centre for Infection Research (DZIF), Partner Site Tuebingen, 72076 Tuebingen, Germany.
Peter RosenbergerDepartment of Anesthesiology and Intensive Care Medicine, Eberhard-Karls University, 72076 Tuebingen, Germany.
Helene A HäberleDepartment of Anesthesiology and Intensive Care Medicine, Eberhard-Karls University, 72076 Tuebingen, Germany.
Ikram AyoubToulouse Institute for Infectious and Inflammatory Diseases, Université de Toulouse, Centre National de la Recherche Scientifique, Institut National de la Santé et de la Recherche Médicale, UPS, 31024 Toulouse, France.
Sally Al-HajjToulouse Institute for Infectious and Inflammatory Diseases, Université de Toulouse, Centre National de la Recherche Scientifique, Institut National de la Santé et de la Recherche Médicale, UPS, 31024 Toulouse, France.
Jakob NilssonDepartment of Immunology, University Hospital Zurich, 8006 Zurich, Switzerland.
Manfred ClaassenDepartment Internal Medicine I, Eberhard-Karls University, 72076 Tuebingen, Germany.
Roland LiblauToulouse Institute for Infectious and Inflammatory Diseases, Université de Toulouse, Centre National de la Recherche Scientifique, Institut National de la Santé et de la Recherche Médicale, UPS, 31024 Toulouse, France.
Guillaume Martin-BlondelToulouse Institute for Infectious and Inflammatory Diseases, Université de Toulouse, Centre National de la Recherche Scientifique, Institut National de la Santé et de la Recherche Médicale, UPS, 31024 Toulouse, France; Department of Infectious and Tropical Diseases, Toulouse University Hospital, 31059 Toulouse, France.
Michael BitzerDepartment Internal Medicine I, Eberhard-Karls University, 72076 Tuebingen, Germany.
Antoine RoquillyUniversité de Nantes, CHU Nantes, Pôle Anesthésie Réanimations, Service d'Anesthésie Réanimation Chirurgicale, Hôtel Dieu, 44093 Nantes, France.
Burkhard BecherInstitute of Experimental Immunology, University of Zurich, 8057 Zurich, Switzerland. Electronic address: becher@immunology.uzh.ch.
University of Zurich · CHUniversity of Tübingen · DEInstitut Toulousain des Maladies Infectieuses et InflammatoiresImation (United States) · USGerman Cancer Research Center · DEUniversity Hospital of Zurich · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Immune profiling of COVID-19 patients has identified numerous alterations in both innate and adaptive immunity. However, whether those changes are specific to SARS-CoV-2 or driven by a general inflammatory response shared across severely ill pneumonia patients remains unknown. Here, we compared the immune profile of severe COVID-19 with non-SARS-CoV-2 pneumonia ICU patients using longitudinal, high-dimensional single-cell spectral cytometry and algorithm-guided analysis. COVID-19 and non-SARS-CoV-2 pneumonia both showed increased emergency myelopoiesis and displayed features of adaptive immune paralysis. However, pathological immune signatures suggestive of T cell exhaustion were exclusive to COVID-19. The integration of single-cell profiling with a predicted binding capacity of SARS-CoV-2 peptides to the patients' HLA profile further linked the COVID-19 immunopathology to impaired virus recognition. Toward clinical translation, circulating NKT cell frequency was identified as a predictive biomarker for patient outcome. Our comparative immune map serves to delineate treatment strategies to interfere with the immunopathologic cascade exclusive to severe COVID-19.

Indexed as

AdultAngiotensin-Converting Enzyme 2Antigen PresentationBiomarkersCD4-Positive T-LymphocytesCOVID-19FemaleHLA AntigensHumansImmunity, InnateImmunophenotypingMaleMiddle AgedNatural Killer T-CellsPneumoniaSARS-CoV-2ACE2 protein, humanAngiotensin-Converting Enzyme 2BiomarkersHLA AntigensbiomarkerCOVID-19GM-CSFhigh-dimensional single cell analysisHLA typingimmune profilingimmunophenotypingpeptide binding strengthSARS-CoV-2spectral flow cytometry

Identifiers

PMID34051147
PMCPMC8106882
OpenAlexW3162323711

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.