Evidence map›Paper›PMID 34050166›Full record

ArticleNature communications2021

Extreme parsimony in ATP consumption by 20S complexes in the global disassembly of single SNARE complexes.

Changwon Kim, Min Ju Shon, Sung Hyun Kim, Gee Sung Eun, Je-Kyung Ryu, Changbong Hyeon, Reinhard Jahn, Tae-Young Yoon

Abstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Energetics, kinetics, and pathways of SNARE assembly in membrane fusion.Critical reviews in biochemistry and molecular biology · 2022
    Review
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Changwon Kim *School of Biological Sciences and Institute for Molecular Biology and Genetics, Seoul National University, Seoul, South Korea.ORCID 0000-0001-8034-509X
Min Ju Shon *School of Biological Sciences and Institute for Molecular Biology and Genetics, Seoul National University, Seoul, South Korea.ORCID 0000-0002-0333-1150
Sung Hyun KimSchool of Biological Sciences and Institute for Molecular Biology and Genetics, Seoul National University, Seoul, South Korea.ORCID 0000-0001-9272-7036
Gee Sung EunSchool of Biological Sciences and Institute for Molecular Biology and Genetics, Seoul National University, Seoul, South Korea.ORCID 0000-0001-5340-6731
Je-Kyung RyuDepartment of Physics, KAIST, Daejeon, South Korea.ORCID 0000-0002-0545-9502
Changbong HyeonKorea Institute for Advanced Study, Seoul, South Korea.ORCID 0000-0002-4844-7237
Reinhard JahnDepartment of Neurobiology, Max-Planck-Institute for Biophysical Chemistry, Göttingen, Germany.ORCID 0000-0003-1542-3498
Tae-Young YoonSchool of Biological Sciences and Institute for Molecular Biology and Genetics, Seoul National University, Seoul, South Korea. tyyoon@snu.ac.kr.ORCID 0000-0002-5184-7725

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Fueled by ATP hydrolysis in N-ethylmaleimide sensitive factor (NSF), the 20S complex disassembles rigid SNARE (soluble NSF attachment protein receptor) complexes in single unraveling step. This global disassembly distinguishes NSF from other molecular motors that make incremental and processive motions, but the molecular underpinnings of its remarkable energy efficiency remain largely unknown. Using multiple single-molecule methods, we found remarkable cooperativity in mechanical connection between NSF and the SNARE complex, which prevents dysfunctional 20S complexes that consume ATP without productive disassembly. We also constructed ATP hydrolysis cycle of the 20S complex, in which NSF largely shows randomness in ATP binding but switches to perfect ATP hydrolysis synchronization to induce global SNARE disassembly, minimizing ATP hydrolysis by non-20S complex-forming NSF molecules. These two mechanisms work in concert to concentrate ATP consumption into functional 20S complexes, suggesting evolutionary adaptations by the 20S complex to the energetically expensive mechanical task of SNARE complex disassembly.

Indexed as

Adenosine TriphosphateAnimalsCattleCricetulusHydrolysisModels, MolecularN-Ethylmaleimide-Sensitive ProteinsProteasome Endopeptidase ComplexProtein BindingProtein MultimerizationRecombinant ProteinsSingle Molecule ImagingSNARE ProteinsSoluble N-Ethylmaleimide-Sensitive Factor Attachment ProteinsAdenosine TriphosphateN-Ethylmaleimide-Sensitive ProteinsProteasome Endopeptidase ComplexRecombinant ProteinsSNARE ProteinsSoluble N-Ethylmaleimide-Sensitive Factor Attachment Proteins

Identifiers

PMID34050166
PMCPMC8163800

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.